HHsearch alignment for GI: 254780450 and conserved domain: PRK09390

>PRK09390 fixJ response regulator FixJ; Provisional.
Probab=99.89  E-value=4.9e-22  Score=173.22  Aligned_cols=119  Identities=27%  Similarity=0.451  Sum_probs=109.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             75699976988999999999998898999989989998999865999548998587889888999999998689982999
Q gi|254780450|r  681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         3 k~tIliVDDh~~vr~gl~~lL~~~~~~v~~~~~~~~~l~~~~~~--~pdlvllDi~mP~~~G~e~l~~l~~~~p~~~viv   80 (202)
T PRK09390          3 KGVVHVVDDDEAMRDSLAFLLDSAGFEVRLFESAQAFLDALPGL--RFGCVVTDVRMPGIDGIELLRRLKARGSPLPVIV   80 (202)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCEEE
T ss_conf             99799984999999999999998899899989999999997657--9799987799999896079999872289986799


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf             90678589987676057980750797999999999998513
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS  801 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~  801 (803)
T Consensus        81 lT~~~~~~~~~~al~~GA~gyl~K~~~~~~L~~aI~~~l~~  121 (202)
T PRK09390         81 MTGHGDVPLAVEAMKLGAIDFIEKPFEDERLIGAIERALAQ  121 (202)
T ss_pred             EEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             97457488889999829464455999999999999999971