HHsearch alignment for GI: 254780450 and conserved domain: PRK09468

>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.90  E-value=2.2e-22  Score=175.66  Aligned_cols=118  Identities=20%  Similarity=0.367  Sum_probs=107.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             75699976988999999999998898999989989998999865999548998587889888999999998689982999
Q gi|254780450|r  681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         5 ~~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~--~~DlvilDi~lp~~dG~~l~~~iR~~~~~~pII~   82 (239)
T PRK09468          5 NYKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTRE--SFHLMVLDLMLPGEDGLSICRRLRSQNNPTPIIM   82 (239)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
T ss_conf             97899990999999999999998899999989999999999758--9989998789988887346777875057877899


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf             9067858998767605798075079799999999999851
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ  800 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~  800 (803)
T Consensus        83 LTa~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allr  122 (239)
T PRK09468         83 LTAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLR  122 (239)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             9466787899999976986885589998999999999986