HHsearch alignment for GI: 254780450 and conserved domain: PRK09468
>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.90 E-value=2.2e-22 Score=175.66 Aligned_cols=118 Identities=20% Similarity=0.367 Sum_probs=107.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 75699976988999999999998898999989989998999865999548998587889888999999998689982999
Q gi|254780450|r 681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF 760 (803)
Q Consensus 681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~ 760 (803)
T Consensus 5 ~~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~--~~DlvilDi~lp~~dG~~l~~~iR~~~~~~pII~ 82 (239)
T PRK09468 5 NYKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTRE--SFHLMVLDLMLPGEDGLSICRRLRSQNNPTPIIM 82 (239)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
T ss_conf 97899990999999999999998899999989999999999758--9989998789988887346777875057877899
Q ss_pred EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf 9067858998767605798075079799999999999851
Q gi|254780450|r 761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ 800 (803)
Q Consensus 761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~ 800 (803)
T Consensus 83 LTa~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allr 122 (239)
T PRK09468 83 LTAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLR 122 (239)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 9466787899999976986885589998999999999986