HHsearch alignment for GI: 254780450 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.92 E-value=9.9e-24 Score=185.20 Aligned_cols=116 Identities=27% Similarity=0.360 Sum_probs=103.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEE
Q ss_conf 56999769889999999999988989999899899989998659995489985878898889999999986--8998299
Q gi|254780450|r 682 AIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKT--YPSLKFI 759 (803)
Q Consensus 682 ~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~--~~~~~ii 759 (803)
T Consensus 3 ~rILiVdD~~~~~~~l~~~L~~~~y~v~~a~~G~eAL~~~~~~--~PDLILlDi~MP~mdG~ev~r~Lk~~~~~~~iPVI 80 (457)
T PRK09581 3 ARILVVDDIPANVKLLEAKLLAEYYTVLTASSGAEAIEICERE--QPDIILLDVMMPGMDGFEVCRRLKSDPATAHIPVV 80 (457)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 7199994989999999999987899999989999999999718--99989992877999999999999659888998499
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 9906785899876760579807507979999999999985
Q gi|254780450|r 760 FISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELL 799 (803)
Q Consensus 760 ~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L 799 (803)
T Consensus 81 vlTa~~d~e~~~~al~~GA~DYL~KP~~~~~L~~ri~~l~ 120 (457)
T PRK09581 81 MVTALDDPSDRVRGLEAGADDFLTKPINDVALFARVKSLT 120 (457)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 9978999999999986488789989999899999999999