HHsearch alignment for GI: 254780450 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=100.00 E-value=0 Score=736.50 Aligned_cols=501 Identities=19% Similarity=0.231 Sum_probs=377.4
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCC-HHHHCCCCHHHHCCCCCCCCHHHH
Q ss_conf 8607899999999999999999983467509998502069983155444445488-466179866661011112202466
Q gi|254780450|r 271 VSRKNCDSGDPSGTIANMRFNRFFNNIPMAIASIDKKGRILRTNAHFLKLFPNCT-EGDGTSNDIFSIVHKNEKRKIIAA 349 (803)
Q Consensus 271 ~Dit~~k~~e~~l~~se~rl~~i~e~~p~~I~~~d~~g~i~~~N~a~~~l~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~ 349 (803)
T Consensus 559 r~ir~R~~ae~~L~~ql~f~~~L~d~iP~pi~v~d~~g~~i~~N~a~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1197)
T PRK09959 559 RSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSESPFKDVFSNTHEV 638 (1197)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999999889999999836998769982556122411888987523144421356532222156777777899
Q ss_pred HHHHHHHCCCCCCCCEEEECC-CCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH-----HHHHHHHH
Q ss_conf 665554112334540488738-850689999873045667761389999985023211221012344-----44446876
Q gi|254780450|r 350 LYDANDQKSDISPIDSPHPQD-ENRYFRFYISATLDRSTEAPEEQAILYTVEITEQKALEARMAQTQ-----KLNAVGTL 423 (803)
Q Consensus 350 ~~~~~~~~~~~~~~e~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~i~~~~DITerk~~E~~L~qa~-----~~~a~~~~ 423 (803)
T Consensus 639 ~~~~~~~~-~~~~~~~~~~~g~~~~~i~~w~~~~--~~~~~~~~~~i~gw~DITerk~~e~~L~~Ak~~Ae~An~AKS~F 715 (1197)
T PRK09959 639 TAETKENR-TIYTQVFEIDNGIEKRCINHWHTLC--NLPASDHAVYICGWQDITETRDLIHALEVERNKAINATVAKSQF 715 (1197)
T ss_pred HHHHHHCC-CCCCEEEECCCCCCCEEEEEEEEEE--CCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87531012-1000145305775423677531000--37644440101154641289999999999999999998888888
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE----EEEEHHHHHHH
Q ss_conf 303425664158999999999985079984788-8899999998888764300454212005843----58534678999
Q gi|254780450|r 424 AGGIAHDFNNVLTAILLSSDHLLLQSRSSDASF-ADLMEIKHNANRAAILVRQLLAFSRKQTMRL----TVLNLTEVIGN 498 (803)
Q Consensus 424 ~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~-~~l~~i~~~~~r~~~li~~lLd~sr~~~~~~----~~~~l~~~i~~ 498 (803)
T Consensus 716 LA~MSHEIRTPLn~IiG~~eLL~~~-~l~~~q~~~~l~~~~~Sa~~LL~LInDILD~SKIEaG~l~l~~~~~~l~~li~~ 794 (1197)
T PRK09959 716 LATMSHEIRTPISSIMGFLELLSGS-GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQN 794 (1197)
T ss_pred HHHCCHHHCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHH
T ss_conf 8747353165689999999998468-999899999999999999999998888899989853886214520179999999
Q ss_pred HHHHHHHHHCCCCCEEEEEECCC-CCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 99999875035681699981489-72269987169999999987422765206788579999985042101224556678
Q gi|254780450|r 499 LRMMIQKLISEPPQVKLTVDYER-DLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNYSDLP 577 (803)
Q Consensus 499 ~~~~~~~~~~~~~~i~~~~~~~~-~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~~~~~~ 577 (803)
T Consensus 795 v~~~~~~~A-~~K~l~l~~~~~~p~~~~v~~D~~Rl~QIL~NLlsN---AIKFT~~G~V~i~~~~~~~~~---------- 860 (1197)
T PRK09959 795 TCHSFGAIA-ASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSN---ALKFTTEGAVKITTSLGHIDD---------- 860 (1197)
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHH---HCCCCCCCEEEEEEEEEECCC----------
T ss_conf 999999999-967968999558987513526788999999999875---374687978999999865179----------
Q ss_pred CCCEEEEEEEECCCCCCHHHHHHCCCCCCC---CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 897899999978866884454202322221---01357765303889999985167549999618894299999437576
Q gi|254780450|r 578 TKDMVLVEVEDTGIGMSPDIMEKIFEPFFT---TKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLPRYVQ 654 (803)
Q Consensus 578 ~~~~v~i~V~D~G~GI~~~~~~~iFepF~t---tk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP~~~~ 654 (803)
T Consensus 861 ~~~~l~~~V~DTGiGI~~~~~~~iF~pF~Q~s~~r~~~-GTGLGLaI~k~LvelMgG~I~v~S~~G~GS~F~~~lpl~~~ 939 (1197)
T PRK09959 861 NHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQT-GSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEIS 939 (1197)
T ss_pred CEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCC
T ss_conf 80699999997787889889975367862477887889-84835999999999879928999359994499999975645
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 64433333322223544445333478756999769889999999999988989999899899989998659995489985
Q gi|254780450|r 655 EHTQESHYSHDIAIIPQEEPADLTGNSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISD 734 (803)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D 734 (803)
T Consensus 940 ~~~~~~~~~~~~-------p~~~-~~~l~ILvVeDn~~Nr~ll~~~L~~lG~~v~~a~nG~eAl~~~~~~--~fDlILmD 1009 (1197)
T PRK09959 940 QQVATVEAKAEQ-------PITL-PEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQ--HYDLLITD 1009 (1197)
T ss_pred CCCCCCCCCCCC-------CCCC-CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEEC
T ss_conf 555566665557-------7767-7898799979989999999999998399999989999999997669--99999987
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf 878898889999999986899829999067858998767605798075079799999999999851
Q gi|254780450|r 735 VVMPEMDGPTLLRELRKTYPSLKFIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ 800 (803)
Q Consensus 735 ~~mp~m~G~~~~~~ir~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~ 800 (803)
T Consensus 1010 i~MP~MDG~e~tr~IR~~~~~~PIialTA~a~~~~~~~cl~aGMdd~L~KPi~l~~L~~~L~~~~~ 1075 (1197)
T PRK09959 1010 VNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQLHQ 1075 (1197)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf 978999899999999646986948999799999999999976998345188989999999985311