HHsearch alignment for GI: 254780450 and conserved domain: PRK10490
>PRK10490 sensor protein KdpD; Provisional.
Probab=100.00 E-value=0 Score=366.17 Aligned_cols=219 Identities=26% Similarity=0.371 Sum_probs=180.1
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----EEEEEH
Q ss_conf 44687630342566415899999999998507998-4788889999999888876430045421200584----358534
Q gi|254780450|r 418 NAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSS-DASFADLMEIKHNANRAAILVRQLLAFSRKQTMR----LTVLNL 492 (803)
Q Consensus 418 ~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~-~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~~----~~~~~l 492 (803)
T Consensus 662 rLRsalLssVSHDLRTPLtsI~G~a~~L~~~~~~~~~~~~~~~~~I~~e~~rL~rLV~nLLdmsRle~G~l~l~~~~~~l 741 (895)
T PRK10490 662 QLRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLTL 741 (895)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 89999998603435786999999999985477788288999999999999999999999999987636997664642069
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC
Q ss_conf 67899999999875035681699981489722699871699999999874227652067885799999850421012245
Q gi|254780450|r 493 TEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFN 572 (803)
Q Consensus 493 ~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~ 572 (803)
T Consensus 742 ~evv~~al~~~~~~~~-~~~i~v~--~~~~~~~v~~D~~lleQVL~NLl~NA--iKytp~~~~I~v~a~~---------- 806 (895)
T PRK10490 742 EEVVGSALQMLEPGLS-QHPINLS--LPEPLTLIHVDGPLFERVLINLLENA--VKYAGAQAEIGIDAHV---------- 806 (895)
T ss_pred HHHHHHHHHHHHHHHC-CCCEEEE--ECCCCCEEEECHHHHHHHHHHHHHHH--HHHCCCCCEEEEEEEE----------
T ss_conf 9999999999986612-6967999--56987069878999999999999999--9858999709999999----------
Q ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCC--CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 566788978999999788668844542023222210135--776530388999998516754999961889429999943
Q gi|254780450|r 573 YSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTKKV--GEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLP 650 (803)
Q Consensus 573 ~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk~~--g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP 650 (803)
T Consensus 807 -----~~~~v~i~V~D~G~GIp~~~~~~IFe~F~R~~~~~~~~GtGLGLaI~k~IveAhGG~I~~~s~~ggGa~F~~~LP 881 (895)
T PRK10490 807 -----EGENLQLDVWDNGPGIPPGQEQLIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAENRPEGGACFRVTLP 881 (895)
T ss_pred -----ECCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEC
T ss_conf -----799999999980898797999975568712899999997447899999999987998999956998069999832
Q ss_pred CCCCCC
Q ss_conf 757664
Q gi|254780450|r 651 RYVQEH 656 (803)
Q Consensus 651 ~~~~~~ 656 (803)
T Consensus 882 l~~pP~ 887 (895)
T PRK10490 882 QEKPPE 887 (895)
T ss_pred CCCCCC
T ss_conf 999899