HHsearch alignment for GI: 254780450 and conserved domain: PRK10604

>PRK10604 sensor protein RstB; Provisional.
Probab=100.00  E-value=3.8e-42  Score=315.00  Aligned_cols=209  Identities=24%  Similarity=0.314  Sum_probs=165.4

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CEEEEEHH
Q ss_conf             44687630342566415899999999998507998478888999999988887643004542120058----43585346
Q gi|254780450|r  418 NAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTM----RLTVLNLT  493 (803)
Q Consensus       418 ~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~----~~~~~~l~  493 (803)
T Consensus       210 ~~~r~f~a~vSHELRTPLt~i~~~lell-~~--~~~~e~---~~l~~~i~~l~~lv~~lL~larl~~~~~~l~~~~~dl~  283 (433)
T PRK10604        210 ASKKQLIDGIAHELRTPLVRLRYRLEMS-DN--LSAAES---QALNRDIGQLEALIEELLTYARLDRPQNELHLSEPDLP  283 (433)
T ss_pred             HHHHHHHHHCCHHHCCHHHHHHHHHHHH-CC--CCHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf             9999998740244316899999999970-49--985789---99999999999999999999763689787877023699


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf             78999999998750356816999814897226998716999999998742276520678857999998504210122455
Q gi|254780450|r  494 EVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNY  573 (803)
Q Consensus       494 ~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~~  573 (803)
T Consensus       284 ~~i~~~~~~~~~~~-~~~~i~l~~~~--~~~~~~~D~~~l~~~l~NLl~N---A~kys-~~~v~v~~~~-----------  345 (433)
T PRK10604        284 AWLSTHLADIQAVT-PEKTVRLKTPH--QGDYGALDMRLMERVLDNLLNN---ALRYS-HSTVETSLLL-----------  345 (433)
T ss_pred             HHHHHHHHHHHHHC-CCCCEEEECCC--CCCEEEECHHHHHHHHHHHHHH---HHHCC-CCCEEEEEEE-----------
T ss_conf             99999999999765-59967997179--8866987899999999999999---98718-9978999999-----------


Q ss_pred             CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCC---C--CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEE
Q ss_conf             6678897899999978866884454202322221---0--1357765303889999985167549999618894299999
Q gi|254780450|r  574 SDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFT---T--KKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIF  648 (803)
Q Consensus       574 ~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~t---t--k~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~  648 (803)
T Consensus       346 ----~~~~~~i~V~D~G~GI~~e~~~~IFepFyR~d~sr~~~~-gG~GLGLaIvk~Iv~~hgG~i~v~s~~~gGa~f~i~  420 (433)
T PRK10604        346 ----DGDQATLIVEDDGPGIAPEERERIFEPFVRLDPSRDRAT-GGCGLGLAIVHSIALAMGGSVNCDTSELGGARFSFS  420 (433)
T ss_pred             ----ECCEEEEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCC-CCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEE
T ss_conf             ----999999999977878898999986579452888889999-961388999999999819989999669984799999


Q ss_pred             ECCCCCC
Q ss_conf             4375766
Q gi|254780450|r  649 LPRYVQE  655 (803)
Q Consensus       649 lP~~~~~  655 (803)
T Consensus       421 LP~~~~~  427 (433)
T PRK10604        421 WPVWHNI  427 (433)
T ss_pred             ECCCCCC
T ss_conf             7799999