HHsearch alignment for GI: 254780450 and conserved domain: PRK10643
>PRK10643 DNA-binding transcriptional regulator BasR; Provisional.
Probab=99.88 E-value=3.4e-21 Score=167.32 Aligned_cols=117 Identities=22% Similarity=0.344 Sum_probs=106.6
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 69997698899999999999889899998998999899986599954899858788988899999999868998299990
Q gi|254780450|r 683 IVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFIS 762 (803)
Q Consensus 683 ~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t 762 (803)
T Consensus 2 kILlVEDd~~~~~~l~~~L~~~g~~V~~a~~~~ea~~~~~~~--~~DlvilDi~lp~~~G~~l~~~ir~~~~~~pII~lt 79 (222)
T PRK10643 2 KILIVEDDTLLLQGLILAAQTEGYACDGVSTAREAEQSLESG--HYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILT 79 (222)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf 799992889999999999997899999989999999999748--998999968889986226899998348998899982
Q ss_pred CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 678589987676057980750797999999999998513
Q gi|254780450|r 763 GYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS 801 (803)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~ 801 (803)
T Consensus 80 ~~~~~~~~~~~l~~GAddyi~KP~~~~eL~ari~~~lrr 118 (222)
T PRK10643 80 ARDTLEDRIAGLDVGADDYLVKPFALEELHARIRALLRR 118 (222)
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 103678899999759977643887689999999999703