HHsearch alignment for GI: 254780450 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.87 E-value=3.9e-21 Score=166.92 Aligned_cols=116 Identities=32% Similarity=0.496 Sum_probs=102.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 75699976988999999999998898999989989998999865999548998587889888999999998689982999
Q gi|254780450|r 681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF 760 (803)
Q Consensus 681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~ 760 (803)
T Consensus 2 ~~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~--~~DlvilDi~lp~~~G~el~~~iR~~-~~~piI~ 78 (224)
T PRK10766 2 SYHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQ--HVDLILLDINLPGEDGLMLTRELRSR-STVGIIL 78 (224)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEECCCCCCCCCCCHHHHHHHC-CCCCEEE
T ss_conf 97199991999999999999998799999989999999999608--99999988999988766137676304-7855686
Q ss_pred EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 906785899876760579807507979999999999985
Q gi|254780450|r 761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELL 799 (803)
Q Consensus 761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L 799 (803)
T Consensus 79 lta~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~all 117 (224)
T PRK10766 79 VTGRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLL 117 (224)
T ss_pred ECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH
T ss_conf 335589899999998494145139998899999999997