HHsearch alignment for GI: 254780450 and conserved domain: PRK10816

>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional.
Probab=99.88  E-value=2.8e-21  Score=167.96  Aligned_cols=117  Identities=24%  Similarity=0.345  Sum_probs=106.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             69997698899999999999889899998998999899986599954899858788988899999999868998299990
Q gi|254780450|r  683 IVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFIS  762 (803)
Q Consensus       683 ~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t  762 (803)
T Consensus         2 kILivEdd~~~~~~l~~~L~~~g~~V~~a~~~~~al~~~~~~--~~dlvilD~~lp~~~G~~l~~~ir~~~~~~piI~lt   79 (223)
T PRK10816          2 RVLVVEDNALLRHHLKVQLQDAGHQVDAAEDAKEADYYLNEH--LPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLT   79 (223)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEE
T ss_conf             899995989999999999997899999989999999999757--998999979998988640012011048987689994


Q ss_pred             CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf             678589987676057980750797999999999998513
Q gi|254780450|r  763 GYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS  801 (803)
Q Consensus       763 ~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~  801 (803)
T Consensus        80 a~~~~~~~~~al~~Gaddyl~KP~~~~eL~arv~~~lrr  118 (223)
T PRK10816         80 ARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR  118 (223)
T ss_pred             CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCC
T ss_conf             445677899999869988641897778999999999665