HHsearch alignment for GI: 254780450 and conserved domain: PRK10840

>PRK10840 transcriptional regulator RcsB; Provisional.
Probab=99.74  E-value=3.1e-16  Score=132.38  Aligned_cols=119  Identities=23%  Similarity=0.292  Sum_probs=107.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCCCEEEEECCCCC---CCHHHHHHHHHHHCCCC
Q ss_conf             56999769889999999999988-98999-989989998999865999548998587889---88899999999868998
Q gi|254780450|r  682 AIVLLVEDEDSVRRGSKRMLETR-GYTVH-EAFSGTDALKVMEKLQGRVDIVISDVVMPE---MDGPTLLRELRKTYPSL  756 (803)
Q Consensus       682 ~~iLvvdD~~~~~~~~~~~L~~~-g~~v~-~a~~g~eal~~~~~~~~~~dlil~D~~mp~---m~G~~~~~~ir~~~~~~  756 (803)
T Consensus         4 irIlIvDDh~lvr~Gl~~~L~~~~~~~vvg~a~~~~~~~~~~~~~--~pDvvllDl~mpg~~~~dGl~~~~~i~~~~p~~   81 (216)
T PRK10840          4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKL--DAHVLITDLSMPGDKYGDGITLIKYIKRHFPSL   81 (216)
T ss_pred             CEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             889998897999999999981599968999879999999998623--989899826779998878999999999858998


Q ss_pred             CEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf             2999906785899876760579807507979999999999985137
Q gi|254780450|r  757 KFIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQSD  802 (803)
Q Consensus       757 ~ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~~  802 (803)
T Consensus        82 ~vivls~~~~~~~v~~al~~Ga~Gyl~K~~~~~~L~~AI~~v~~G~  127 (216)
T PRK10840         82 SIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGK  127 (216)
T ss_pred             EEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf             0899847787899999985897489987899999999999998799