HHsearch alignment for GI: 254780450 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=97.66 E-value=0.0056 Score=38.91 Aligned_cols=113 Identities=14% Similarity=0.139 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC-CCCCEEEEHHHHHHHCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999852596199992-99968976467986429996780456321888088204899999986200267
Q gi|254780450|r 152 QEKFFRELQNAIDYLDHSPVGFMSAD-HQGKILYINATLAEWIGIDLTTFTSKSISIGDITAGEGLALIQAIRTEPSHQK 230 (803)
Q Consensus 152 ee~l~~~~~~~~~~le~a~~gi~~~D-~~g~i~~~N~~~~~llG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (803)
T Consensus 349 a~~l~e~e~fnr~~i~~apvg~~~l~~~dg~~~~~n~~~~~~~~---------------~~~~~~~~~~~~~~~~---~~ 410 (947)
T PRK10841 349 ALRLEEHEQFNRKIVASAPVGICILRTSDGTNILSNELAHNYLN---------------MLTHEDRQRLTQIICG---QQ 410 (947)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHH---------------HCCCCHHHHHHHHHHC---CC
T ss_conf 88998788877889861771379997068863310389999876---------------2375528999999861---37
Q ss_pred EEEEEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 14888999980489799999955676538885547999998607899999999999999
Q gi|254780450|r 231 ITTLDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIANMR 289 (803)
Q Consensus 231 ~~~~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~se~r 289 (803)
T Consensus 411 ~~~~~~---~~~~~~~l~~~~~~~ry~---~~-~v~~c~~~Disar~~~e~~L~~a~~A 462 (947)
T PRK10841 411 VNFVDV---LTSNNTNLQISFVHSRYR---NE-NVAICVLVDVSARVKMEESLQEMAQA 462 (947)
T ss_pred CCCEEE---EECCCCEEEEEEEEEEEC---CC-CEEEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 883489---935985799998653126---86-07999998540789999999999999