HHsearch alignment for GI: 254780450 and conserved domain: PRK11073
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=98.90 E-value=8.4e-08 Score=72.91 Aligned_cols=115 Identities=17% Similarity=0.120 Sum_probs=71.1
Q ss_pred HHHHHHCCCEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCE-EEEEEECC
Q ss_conf 99985249809999599938981066886709995673156110002787616789999999832432320-38986010
Q gi|254780450|r 30 TIFMDSEPEGILITNERGHIIYANNAYNALTNAVWNKRTKSLESLLSRNQEASEALYRLINSLRLKSEGSE-EFRLMQSL 108 (803)
Q Consensus 30 r~lld~~~d~i~v~D~~G~i~~~N~a~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-e~~~~~~~ 108 (803)
T Consensus 10 ~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~g~~~~~~~G~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~----- 82 (348)
T PRK11073 10 GQILNSLINSILLLDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNI--ELMQESLQAGQGFTDNEVT----- 82 (348)
T ss_pred HHHHHHHHHHHEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCH--HHHHHHHHCCCCCCCCEEE-----
T ss_conf 999986607964998979701283999999785989985996899846653018--9999999738974132399-----
Q ss_pred EEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 000489867999999999982378806999999978338899999999999
Q gi|254780450|r 109 NNYSQNSEPHWYRLKARVLPISLHKEKLLYAWRITDITSERKDQEKFFREL 159 (803)
Q Consensus 109 ~~~~~~g~~~w~~i~~~~~~~~~~~~~~~~~~~i~DIT~~k~~ee~l~~~~ 159 (803)
T Consensus 83 --~~~~~~~~~~~~~~~~~--~~~----~~l~~~~di~~~k~l~~e~~~~~ 125 (348)
T PRK11073 83 --LVIDGRSHILSLTAQRL--PEG----MILLEMAPMDNQRRLSQEQLQHA 125 (348)
T ss_pred --EEECCEEEEEEEEEEEC--CCC----EEEEEEEECHHHHHHHHHHHHHH
T ss_conf --99899699999999982--586----89999996279999999999999