HHsearch alignment for GI: 254780450 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=100.00 E-value=0 Score=654.31 Aligned_cols=369 Identities=22% Similarity=0.316 Sum_probs=304.9
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE----EE
Q ss_conf 44444687630342566415899999999998507998478888999999988887643004542120058435----85
Q gi|254780450|r 415 QKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTMRLT----VL 490 (803)
Q Consensus 415 ~~~~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~~~~----~~ 490 (803)
T Consensus 288 ~A~r~Ks~FLAnmSHEiRTPLn~IiG~~~ll~~-~~l~~~q~~~l~~i~~s~~~Ll~lIndiLD~SkiEag~l~le~~~f 366 (920)
T PRK11107 288 EAARIKSEFLANMSHELRTPLNGVIGFTRQTLK-TPLTPTQRDYLQTIERSANNLLAIINDILDFSKLEAGKLILENIPF 366 (920)
T ss_pred HHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 999999999996648654219999999999856-9999999999999999999999999999999998459836740167
Q ss_pred EHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE-EEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC
Q ss_conf 3467899999999875035681699981489722-699871699999999874227652067885799999850421012
Q gi|254780450|r 491 NLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLW-GVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIH 569 (803)
Q Consensus 491 ~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~ 569 (803)
T Consensus 367 ~l~~~~~~v~~~~~~~a-~~k~l~l~~~~~~~~p~~v~gD~~Rl~QIl~NLl~N---AiKfT~~G~I~v~v~~~~~~~-- 440 (920)
T PRK11107 367 SLRETLDEVVTLLAHSA-HEKGLELTLNIDPDVPDNVIGDPLRLQQIITNLVGN---AIKFTESGNIDILVELRALSD-- 440 (920)
T ss_pred CHHHHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHH---HHHCCCCCCEEEEEEEEECCC--
T ss_conf 89999999999999999-973987999978999730653899999999999999---997188993799999996479--
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCC-----CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEE
Q ss_conf 2455667889789999997886688445420232222-----10135776530388999998516754999961889429
Q gi|254780450|r 570 TFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFF-----TTKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTI 644 (803)
Q Consensus 570 ~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~-----ttk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~ 644 (803)
T Consensus 441 --------~~~~l~~~V~DTGiGI~~~~~~~iF~~F~q~d~s~~r~~g-GtGLGLaI~k~Lv~~mgG~I~v~S~~g~GS~ 511 (920)
T PRK11107 441 --------EKVQLEVQIRDTGIGISERQQSQLFQAFRQADASISRRHG-GTGLGLVITQKLVNEMGGDISFHSQPNRGST 511 (920)
T ss_pred --------CEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCCEEEEECCCCCEE
T ss_conf --------8489999999970586999999785420156765445679-8774299999999980991799954899748
Q ss_pred EEEEECCCCCCCCCCCCCCCC-----------------------------------------------------------
Q ss_conf 999943757664433333322-----------------------------------------------------------
Q gi|254780450|r 645 FRIFLPRYVQEHTQESHYSHD----------------------------------------------------------- 665 (803)
Q Consensus 645 F~i~lP~~~~~~~~~~~~~~~----------------------------------------------------------- 665 (803)
T Consensus 512 F~Ftlpl~~~~~~~~~~~~~~~L~g~~vlvve~~~~~~~~l~~~L~~~g~~v~~~~~~~~l~~~~~D~~li~~~~~~~~~ 591 (920)
T PRK11107 512 FWFHLPLDLNPNPIIDGLPTDCLAGKRLLYVEPNSLAAQATLDLLSETPLEVTYSPTLSQLPEAHYDYLLLGCPVTFREP 591 (920)
T ss_pred EEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCEEEECCCCCCCCH
T ss_conf 99999804766544456662342587699976977899999999997496457517887751368887996166666540
Q ss_pred -------------------------------------------CC------------------CCCCCCCCCCCCCCCEE
Q ss_conf -------------------------------------------22------------------35444453334787569
Q gi|254780450|r 666 -------------------------------------------IA------------------IIPQEEPADLTGNSAIV 684 (803)
Q Consensus 666 -------------------------------------------~~------------------~~~~~~~~~~~~~~~~i 684 (803)
T Consensus 592 ~~~~~~~l~~~~~~~~~~il~~~s~~~~~~~~~~~~~~~~~L~kPv~~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~lrV 671 (920)
T PRK11107 592 LTMLHERLAKAKSMTDFLILALPCHEQVNAEQLKQPGADACLSKPLSETRLLPALLTEPCHHKQPPLLPPTDQSKLPLTV 671 (920)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 66789998630035784699715643455788764253021127776889999872233455555666766322467749
Q ss_pred EEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEEEEE
Q ss_conf 99769889999999999988989999899899989998659995489985878898889999999986--8998299990
Q gi|254780450|r 685 LLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKT--YPSLKFIFIS 762 (803)
Q Consensus 685 LvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~--~~~~~ii~~t 762 (803)
T Consensus 672 LvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~--~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIAlT 749 (920)
T PRK11107 672 MAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQR--PFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIAVT 749 (920)
T ss_pred EEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 9984889999999999998498899989999999997479--99789988999999899999999818678989599997
Q ss_pred CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 678589987676057980750797999999999998513
Q gi|254780450|r 763 GYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS 801 (803)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~ 801 (803)
T Consensus 750 A~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~~~ 788 (920)
T PRK11107 750 AHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWKPG 788 (920)
T ss_pred CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCC
T ss_conf 998989999999779993872879999999999986788