HHsearch alignment for GI: 254780450 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=100.00 E-value=0 Score=504.24 Aligned_cols=354 Identities=24% Similarity=0.364 Sum_probs=296.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999999999834675099985020699831554444454884661798666610111122024666655541
Q gi|254780450|r 277 DSGDPSGTIANMRFNRFFNNIPMAIASIDKKGRILRTNAHFLKLFPNCTEGDGTSNDIFSIVHKNEKRKIIAALYDANDQ 356 (803)
Q Consensus 277 k~~e~~l~~se~rl~~i~e~~p~~I~~~d~~g~i~~~N~a~~~l~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (803)
T Consensus 250 N~ma~~L~~~~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~ll-g~~~~e~ig~~~~~l~~~~~---~~~~~~~~l~~ 325 (607)
T PRK11360 250 NNLAQALREARTLNELIIENAADGIIAIDRQGDITTMNPAAEVIT-GYQRHELVGQPYSMLFDNTQ---FYSPVLDTLEH 325 (607)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHH-CCCHHHHCCCCHHHHCCCHH---HHHHHHHHHHC
T ss_conf 999999999999899998610466999979994999838999985-87978985967999579576---77999999853
Q ss_pred CCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 12334540488738850689999873045667761389999985023211221012344444468763034256641589
Q gi|254780450|r 357 KSDISPIDSPHPQDENRYFRFYISATLDRSTEAPEEQAILYTVEITEQKALEARMAQTQKLNAVGTLAGGIAHDFNNVLT 436 (803)
Q Consensus 357 ~~~~~~~e~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~i~~~~DITerk~~E~~L~qa~~~~a~~~~~a~isHelr~pL~ 436 (803)
T Consensus 326 ~~~~~~~~~~~~~~~~-~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~erlaalGe~~A~vaHElRnPLt 404 (607)
T PRK11360 326 GTEHVALEISFPGRDR-TIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARAERLAALGELMAGVAHEIRNPLT 404 (607)
T ss_pred CCCCCCEEEEECCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7742124899605883-499999985357689858899999995778999999999999999999999998998715499
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99999999985079984788889999999888876430045421200584358534678999999998750356816999
Q gi|254780450|r 437 AILLSSDHLLLQSRSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLT 516 (803)
Q Consensus 437 ~I~g~~~ll~~~~~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~~~ 516 (803)
T Consensus 405 ~I~g~~elL~~~~-~~~~~~~~l~~i~~e~~Rl~~li~~lL~~sr~~~~~~~~v~l~~l~~~~~~~~~~~~-~~~~i~l~ 482 (607)
T PRK11360 405 AIRGYVQILRQQT-SDPIHQEYLSVVLREVDSLNKVIQQLLEFSRPRHSQWQQVSLNALVEEVLVLVQTAG-VQARVDFI 482 (607)
T ss_pred HHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHH-HHCCCEEE
T ss_conf 9999999986689-987999999999999999999999999852778888847869999999999999988-86796899
Q ss_pred EECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 81489722699871699999999874227652067885799999850421012245566788978999999788668844
Q gi|254780450|r 517 VDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPD 596 (803)
Q Consensus 517 ~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~ 596 (803)
T Consensus 483 ~~~~~~~~~v~~D~~~l~qvl~NLi~NAi~a--~~~~g~I~i~~~~~--------------~~~~v~i~V~D~G~GI~~e 546 (607)
T PRK11360 483 TELDNELPPINADRELLKQVLLNILINAVQA--ISARGKIRIRTWQY--------------SDSQQAISIEDNGCGIDLE 546 (607)
T ss_pred EECCCCCCEEEECHHHHHHHHHHHHHHHHHH--CCCCCEEEEEEEEE--------------CCCEEEEEEEECCCCCCHH
T ss_conf 9818988769988899999999999996286--28996799999993--------------6987999999867686989
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 54202322221013577653038899999851675499996188942999994375766
Q gi|254780450|r 597 IMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLPRYVQE 655 (803)
Q Consensus 597 ~~~~iFepF~ttk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP~~~~~ 655 (803)
T Consensus 547 ~~~~IFepF~ttk~--~GtGLGLaI~k~Ive~hgG~I~v~S~~g~GT~F~i~LPl~~~~ 603 (607)
T PRK11360 547 LLKKIFDPFFTTKA--SGTGLGLALSQRIINAHQGDIRVASLPGYGTTFTLILPINPQG 603 (607)
T ss_pred HHHHHCCCCCCCCC--CCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCC
T ss_conf 99645589754899--9813379999999998899899996699986999998068988