HHsearch alignment for GI: 254780450 and conserved domain: PRK13557
>PRK13557 histidine kinase; Provisional.
Probab=99.73 E-value=7.3e-16 Score=129.73 Aligned_cols=134 Identities=10% Similarity=0.096 Sum_probs=105.6
Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC---CCCCEEEEHHHHHHHCCCCHHHHCCCCCCHHHHCCCH-HHHH
Q ss_conf 78338899999999999999999852596199992---9996897646798642999678045632188808820-4899
Q gi|254780450|r 143 TDITSERKDQEKFFRELQNAIDYLDHSPVGFMSAD---HQGKILYINATLAEWIGIDLTTFTSKSISIGDITAGE-GLAL 218 (803)
Q Consensus 143 ~DIT~~k~~ee~l~~~~~~~~~~le~a~~gi~~~D---~~g~i~~~N~~~~~llG~~~~e~~~~~~~~~~~~~~~-~~~~ 218 (803)
T Consensus 20 ~~~~~~~~---------~~~~~~v~~~~~~~~~~d~~~~Dg~I~~vN~af~~~tGYs~eEviGk~~--~~L~~p~~~~~~ 88 (538)
T PRK13557 20 GDVSDHRS---------DIFFAAVETTRMPMIVTDPRQPDNPIVFANRAFLEMTGYAAEEIIGNNC--RFLQGPETDRAT 88 (538)
T ss_pred HHHHHHHH---------HHHHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHHCCCHHHHCCCCH--HHCCCCCCCHHH
T ss_conf 10567889---------9999999607973899358999987999839999987959999869998--770898899999
Q ss_pred HHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 9999862002671488899998048979999995567653888554799999860789999999999999
Q gi|254780450|r 219 IQAIRTEPSHQKITTLDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIANM 288 (803)
Q Consensus 219 ~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~se~ 288 (803)
T Consensus 89 ~~~~~~~i~~~~~~~~E~~n~r-KDG~~~w~~~~i~pv~d~~G~~~~~~~i~~DITerk~~E~~L~qaqk 157 (538)
T PRK13557 89 VADVRDAIAERREIATEILNYR-KDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQK 157 (538)
T ss_pred HHHHHHHHHCCCCEEEEEEEEC-CCCCEEEEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 9999999975993687999987-99999999989999998999999999988344499999999999999