HHsearch alignment for GI: 254780450 and conserved domain: TIGR01386
>TIGR01386 cztS_silS_copS heavy metal sensor kinase; InterPro: IPR006290 Members of this family contain a sensor histidine kinase domain (IPR003661 from INTERPRO) and a domain found in bacterial signal proteins (IPR003660 from INTERPRO). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. ; GO: 0000155 two-component sensor activity, 0016775 phosphotransferase activity nitrogenous group as acceptor, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=100.00 E-value=7.6e-39 Score=291.71 Aligned_cols=212 Identities=28% Similarity=0.440 Sum_probs=173.9
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCE----EEEEH
Q ss_conf 446876303425664158999999999985079984788889-9999998888764300454212005843----58534
Q gi|254780450|r 418 NAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADL-MEIKHNANRAAILVRQLLAFSRKQTMRL----TVLNL 492 (803)
Q Consensus 418 ~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~~~l-~~i~~~~~r~~~li~~lLd~sr~~~~~~----~~~~l 492 (803)
T Consensus 259 ~rLs~FSaDlAHElRTPltNL~~~tQVaLS~~R~~-~eY~e~l~snlEEl~RL~rMv~DMLFLAraD~~~~~~~~~~ldL 337 (483)
T TIGR01386 259 QRLSQFSADLAHELRTPLTNLLGQTQVALSRPRSG-EEYREVLESNLEELERLSRMVEDMLFLARADNGRLALEREELDL 337 (483)
T ss_pred HHHHHHCHHHHHHHHCCHHHHHHHHHEEECCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99973171456664012544566500200568898-89999998618999999999989998998523456777875127
Q ss_pred HHHHH-HHHHHHHHHHCCCCC--EEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC
Q ss_conf 67899-999999875035681--699981489722699871699999999874227652067885799999850421012
Q gi|254780450|r 493 TEVIG-NLRMMIQKLISEPPQ--VKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIH 569 (803)
Q Consensus 493 ~~~i~-~~~~~~~~~~~~~~~--i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~ 569 (803)
T Consensus 338 ~ae~~l~~~~~fE~lAee-~~Piv~l~v~G~--P~~~~gD~~lfrRA~sNLLsNA--~rhtp~g~~I~v~~~~------- 405 (483)
T TIGR01386 338 AAELALKVAEYFEPLAEE-RGPIVSLRVEGE--PAEVRGDALLFRRALSNLLSNA--LRHTPAGSTIDVRVER------- 405 (483)
T ss_pred HHHHHHHHHHHHHCCCCC-CCCEEEEEEECC--CCEEECCHHHHHHHHHHHHHHH--HHHCCCCCEEEEEEEE-------
T ss_conf 888878888774202767-886689998324--2056024788899999999999--8608998858999961-------
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCC-----CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEE
Q ss_conf 24556678897899999978866884454202322221-----0135776530388999998516754999961889429
Q gi|254780450|r 570 TFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFT-----TKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTI 644 (803)
Q Consensus 570 ~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~t-----tk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~ 644 (803)
T Consensus 406 --------~~d~~~~~v~N~G~~Ip~e~L~rLFdRFYR~D~aR~~G~~~g~GLGLAIV~SI~~~HGG~~~aeS~~~~~t~ 477 (483)
T TIGR01386 406 --------RADEVRVSVENTGDGIPPEHLSRLFDRFYRVDPARSNGSQEGTGLGLAIVRSIMEAHGGRAEAESEADGKTR 477 (483)
T ss_pred --------CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE
T ss_conf --------477568998358799985235655530026763332766456760489999999823986899864892489
Q ss_pred EEEEEC
Q ss_conf 999943
Q gi|254780450|r 645 FRIFLP 650 (803)
Q Consensus 645 F~i~lP 650 (803)
T Consensus 478 F~l~fp 483 (483)
T TIGR01386 478 FKLRFP 483 (483)
T ss_pred EEEECC
T ss_conf 876339