HHsearch alignment for GI: 254780450 and conserved domain: TIGR01387
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.84 E-value=2.9e-21 Score=167.78 Aligned_cols=116 Identities=31% Similarity=0.441 Sum_probs=103.1
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 99976988999999999998898999989989998999865999548998587889888999999998689982999906
Q gi|254780450|r 684 VLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFISG 763 (803)
Q Consensus 684 iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t~ 763 (803)
T Consensus 1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~--~Y~liILDvmLPG~DGW~vl~~LR~~~~~~PVl~LTA 78 (219)
T TIGR01387 1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKD--DYDLIILDVMLPGMDGWQVLKALRRSGKETPVLFLTA 78 (219)
T ss_pred CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCC--CCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 96763086026765305201234798877686247543688--8308996325889506899999840789873488833
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 78589987676057980750797999999999998513
Q gi|254780450|r 764 YAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS 801 (803)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~ 801 (803)
T Consensus 79 ~D~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~ 116 (219)
T TIGR01387 79 RDSVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRR 116 (219)
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 78845435301147865413787760379999987677