HHsearch alignment for GI: 254780450 and conserved domain: pfam00072
>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=99.92 E-value=4e-24 Score=187.95 Aligned_cols=111 Identities=33% Similarity=0.588 Sum_probs=104.1
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 99976988999999999998898999989989998999865999548998587889888999999998689982999906
Q gi|254780450|r 684 VLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFISG 763 (803)
Q Consensus 684 iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t~ 763 (803)
T Consensus 1 ILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~--~~dlvi~Di~mP~~dG~el~~~ir~~~~~~piI~~T~ 78 (111)
T pfam00072 1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLKEK--RPDLILLDIRMPGMDGLELLRRIRRRPPTTPVIVLTA 78 (111)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 09998989999999999998899999989999999999847--9989999536899501579999973599980999975
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 785899876760579807507979999999999
Q gi|254780450|r 764 YAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVH 796 (803)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~ 796 (803)
T Consensus 79 ~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~ir 111 (111)
T pfam00072 79 HGDEEDAVEALKAGANDFLSKPFDPEELVAALR 111 (111)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCC
T ss_conf 089999999997798779949999899998529