HHsearch alignment for GI: 254780450 and conserved domain: smart00086
>smart00086 PAC Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain). PAC motif occurs C-terminal to a subset of all known PAS motifs. It is proposed to contribute to the PAS domain fold.
Probab=94.56 E-value=0.12 Score=29.64 Aligned_cols=32 Identities=22% Similarity=0.094 Sum_probs=14.6
Q ss_pred CEEEEEEEEEEEEECCCCCEEEEEEEEEEHHH
Q ss_conf 97999999556765388855479999986078
Q gi|254780450|r 244 GHGIPVKIVHHILASCDGKPGESRTVVVSRKN 275 (803)
Q Consensus 244 g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~ 275 (803)
T Consensus 11 G~~~w~~~~~~~~~~~~g~~~~~i~~~~DIte 42 (43)
T smart00086 11 GSYIWVLVSASPIRDEDGEVEGILGVVRDITE 42 (43)
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEECCC
T ss_conf 99999999999999989899999999971779