HHsearch alignment for GI: 254780450 and conserved domain: smart00387
>smart00387 HATPase_c Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Probab=99.92 E-value=1.2e-24 Score=191.63 Aligned_cols=106 Identities=47% Similarity=0.670 Sum_probs=93.0
Q ss_pred ECHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCC
Q ss_conf 871699999999874227652067-8857999998504210122455667889789999997886688445420232222
Q gi|254780450|r 528 TDLSQFEQVLVNLCVNAHHAIMLK-ESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFF 606 (803)
Q Consensus 528 ~D~~~l~qvl~NLl~NA~~A~~~~-~~G~v~i~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ 606 (803)
T Consensus 1 ~d~~~l~~il~Nli~NA---ik~~~~~~~I~i~~~~---------------~~~~~~i~V~D~G~Gi~~~~~~~if~~f~ 62 (111)
T smart00387 1 GDPDRLRQVLSNLLDNA---IKYTPEGGRITVTLER---------------DGDHLEITVEDNGPGIPPEDLEKIFEPFF 62 (111)
T ss_pred CCHHHHHHHHHHHHHHH---HHHCCCCCEEEEEEEE---------------CCCEEEEEEEECCCCCCHHHHHHCCCCCE
T ss_conf 98899999999999999---9967799789999998---------------39999999998899739899964269947
Q ss_pred CCCC---CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 1013---57765303889999985167549999618894299999437
Q gi|254780450|r 607 TTKK---VGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLPR 651 (803)
Q Consensus 607 ttk~---~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP~ 651 (803)
T Consensus 63 ~~~~~~~~~~g~GlGL~i~~~i~~~~~G~i~i~s~~~~Gt~~~i~lP~ 110 (111)
T smart00387 63 RTDGRSRKIGGTGLGLSIVKKLVELHGGEISVESEPGGGTTFTITLPL 110 (111)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf 779999887976648999999999879989999659981899999981