RPSBLAST alignment for GI: 254780450 and conserved domain: COG5000

>gnl|CDD|34605 COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]. Length = 712
 Score = 80.8 bits (199), Expect = 1e-15
 Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 21/247 (8%)

Query: 410 RMAQTQKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLME-----IKH 464
            +   Q+  A G +A  IAH+  N LT I LS++ LL +         ++ +     I  
Sbjct: 476 DLVIAQRSAAWGDVARRIAHEIKNPLTPIQLSAERLLRKLGKEIDEDREVFDRCTDTIIR 535

Query: 465 NANRAAILVRQLLAFSRKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLW 524
                  +V +  AF+R    +L   +L  ++  +   + ++ ++          E  L 
Sbjct: 536 QVEDIKRMVDEFRAFARMPAPKLEKSDLRALLKEV-SFLYEIGNDHIVFAAEFGGE-PLI 593

Query: 525 GVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLV 584
           G+  D +   QV  NL  NA  AI   E+            T +   +  D      ++V
Sbjct: 594 GM-ADATLLGQVFGNLLKNAAEAIEAVEAEE--------RRTALIRVSLDD--ADGRIVV 642

Query: 585 EVEDTGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYI-LPESEVGKGT 643
           +V D G G   +   +  EP+ TT++  +GTGLGL++V  I+ + GG + L  +    G 
Sbjct: 643 DVIDNGKGFPRENRHRALEPYVTTRE--KGTGLGLAIVKKIVEEHGGRLELHNAPDFDGA 700

Query: 644 IFRIFLP 650
           + RI  P
Sbjct: 701 MIRIKFP 707