HHsearch alignment for GI: 254780451 and conserved domain: PRK12466
>PRK12466 isopropylmalate isomerase large subunit; Provisional.
Probab=100.00 E-value=0 Score=995.74 Aligned_cols=458 Identities=26% Similarity=0.349 Sum_probs=393.3
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHH
Q ss_conf 66579999999861235545777663645325220000035799999999999997199999928789813998683211
Q gi|254780451|r 57 GCTVTKEQIHAFVKWLDNKGTVESEVSYRFSRVLMQDFTGVPAVVDLAAMRDAIVVLGGDPQNINPLVPVDLVIDHSLIV 136 (896)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~~~~~~~ei~f~p~Rv~~qD~Tg~pa~vdlaamR~~~~~~g~dp~~inp~vp~dlviDHsv~v 136 (896)
T Consensus 3 ~~Tl~eKI~~~h~~~----~~~~~~~~~~vD~~l~hD~T~p~a~~~l~~~~~~v---------~~p~~~~-~~~DH~vp~ 68 (472)
T PRK12466 3 PRTLYDKLWDSHVVA----RLDDGAVLLYIDRHLLHEYTSPQAFAGLRARGRTV---------RRPDLTL-AVVDHVVPT 68 (472)
T ss_pred CCCHHHHHHHHHCCC----CCCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCC---------CCCCCCE-EEECCCCCC
T ss_conf 624999999984686----56898378991167663364699999999759984---------4799972-840989887
Q ss_pred HCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE-EEE
Q ss_conf 005998---8999899988754267899998774214880786088762167789863351131036886179830-132
Q gi|254780451|r 137 DYSGNK---DAVTRNKDLEYQRNEERYRFLKWGQKSFKNFRVVPPGTGICHQINLEYLGQSVWTKNENGENIAYPD-TCV 212 (896)
Q Consensus 137 d~~g~~---~a~~~n~~~e~~rN~Ery~Flkwa~~~f~~~~v~pPG~GI~HQvnlE~la~vv~~~~~~~~~~a~Pd-tlV 212 (896)
T Consensus 69 ~~~~~~~~~~~~~~~~~~~lr~~a~~~g--------i~~f~~~~~~~GI~H~v~~E-------------~g~~~PG~~iv 127 (472)
T PRK12466 69 RPGRDRGITDPGGALQVDYLRENCADHG--------IRLFDVDDPRQGIVHVVAPE-------------LGLTLPGMTIV 127 (472)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHC--------CCCCCCCCCCCCEEEEECCC-------------CCCCCCCEEEE
T ss_conf 6554455468679999999999999839--------71047899998768376443-------------57566883798
Q ss_pred ECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf 06887644452012320343489999970775141167289999976778644368899999998410221212799961
Q gi|254780451|r 213 GTDSHTTMINALGILGWGVGGIEAEAAMLGCPISMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEGVVSKFVEFFG 292 (896)
Q Consensus 213 GtDSHT~~~galG~la~GVGg~eaea~mlGqp~~~~vPevigv~L~G~L~~gVtakDiiL~i~~~Lr~~Gvvgk~vEf~G 292 (896)
T Consensus 128 gtDSHT~t~GalGala~GvG~td~~~~m~tg~~~~~vPe~i~v~l~G~l~~gVtaKDliL~ii~~l~~~G~~g~~vEF~G 207 (472)
T PRK12466 128 CGDSHTTTYGAFGALAFGIGTSEVEHVLATQTLVYRKPKTMRVRVDGELPPGVTAKDLILALIARIGADGATGYAIEFAG 207 (472)
T ss_pred ECCCCCCCCCCCCEEEECCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 35666556675322574687999999983493786567189999947798998651899999999643773148999987
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 55001787563212000100372037751998999999863999889999998746410236767667886306999980
Q gi|254780451|r 293 SGFESMVLADRATIANMAPEYGATCGFFPVDRGTIDYLRLSGRSNSRVDLVEAYTKVQGMWREDIDYEKVAFTKKMKLDL 372 (896)
Q Consensus 293 ~gi~~LS~~dRaTIaNMa~E~GAt~gifp~De~T~~YL~~tGR~~~~v~lve~Y~ka~~l~~~~~~d~~a~Y~~vieiDL 372 (896)
T Consensus 208 ~gi~~Ls~~~R~Ti~NMa~E~GA~~gif~~D~~t~~YL~~r~~~~~~----~~~~~~~~~~~~~~~D~da~Y~~~i~iDl 283 (472)
T PRK12466 208 EAIRALSMEGRMTLCNMAVEAGARGGLIAPDETTFDYLRGRPFAPKG----ALWEAALAYWRTLRSDADAVFDREVEIDA 283 (472)
T ss_pred HHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHH----HHHHHHHHHHHHCCCCCCCCCCEEEEEEC
T ss_conf 35402898775535305502162377755768899998636664257----89999999986346787886566999988
Q ss_pred CCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 31430122656656413677730116687664001100232102457888887555445753104676545999877889
Q gi|254780451|r 373 GNVSPSVAGPRRPESRLSLSEVPSSFVTEMNEYYKKSHTLDEKYPVKGCDFHLKHGDVAIASITSCTNTFNPSVMIGAGL 452 (896)
Q Consensus 373 s~ieP~VAgP~~P~d~v~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~VvIAaIgSCTNtSnp~~miaAgl 452 (896)
T Consensus 284 s~leP~Va~P~~P~~~v~v~e~~p~~~~~~~~~~~~~~~~a~~y~~l~~~~~~~~~~Id~a~IGSCTNgr~~Dl~~aA~i 363 (472)
T PRK12466 284 ADIAPQVTWGTSPDQALPIDGRVPDPAAEADPARRAALERALDYMGLTPGQPLAGIPIDRVFIGSCTNGRIEDLRAAAAV 363 (472)
T ss_pred CCCEEECCCCCCCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf 87612215899986146763357882451475667678876653268899433574551799946789983799999999
Q ss_pred HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEE
Q ss_conf 99889864987586730797016189999999858857777505302055322421277768830221011366358786
Q gi|254780451|r 453 LARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGCTTCIGNSGALKKEISEVIHQKSLVVAGV 532 (896)
Q Consensus 453 lAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~~Gll~~L~~aGf~i~~~GCg~CiGnsG~l~~~i~~~i~~~~l~~~sV 532 (896)
T Consensus 364 l------kG~kv~~~Vr~~v~PgS~~V~~~~~~~Gl~~~l~~aGa~i~~~gCg~C~G~~~~~~~~-------ge---~~v 427 (472)
T PRK12466 364 L------RGRKVAPGVRALVVPGSGAVKRQAEAEGLDRIFIAAGFEWREPGCSMCLAMNGDVLAP-------GE---RCA 427 (472)
T ss_pred H------HCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHCCCEECCCCCHHHHCCCCCCCCC-------CC---EEE
T ss_conf 7------3786388877799689899999999877588999769789987643224809887999-------99---899
Q ss_pred ECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 3367666654685433100059789999985161222310023
Q gi|254780451|r 533 LSGNRNFEGRISPDVEANYLLSPPLVVAYALAGNVRKNLIKDP 575 (896)
Q Consensus 533 ~SgNRNFeGR~~p~~~~~yLaSP~lVvA~AiaG~I~~d~~~dp 575 (896)
T Consensus 428 st~NRNF~GR~g~~~~-~yLaSP~~vaAsAi~G~i-----tdp 464 (472)
T PRK12466 428 STTNRNFEGRQGPGAR-THLMSPAMAAAAAVAGHI-----VDV 464 (472)
T ss_pred EEECCCCCCCCCCCCC-EEECCHHHHHHHHHCEEE-----CCH
T ss_conf 7027898888997985-897699999999847273-----678