RPSBLAST alignment for GI: 254780451 and conserved domain: cd01581

>gnl|CDD|153131 cd01581, AcnB, Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle. Aconitase B catalytic domain. Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle. Aconitase has an active (4FE-4S) and an inactive (3FE-4S) form. The active cluster is part of the catalytic site that interconverts citrate, cis-aconitase and isocitrate. The domain architecture of aconitase B is different from other aconitases in that the catalytic domain is normally found at C-terminus for other aconitases, but it is at N-terminus for B family. It also has a HEAT domain before domain 4 which plays a role in protein-protein interaction. This alignment is the core domain including domains 1,2 and 3. Length = 436
 Score = 49.4 bits (118), Expect = 4e-06
 Identities = 94/420 (22%), Positives = 152/420 (36%), Gaps = 104/420 (24%)

Query: 178 PGTGICHQINLEYLGQSVWTKNENGENIAYPDTC-VGTDSHTTMINALGILGWGVG-GIE 235
           PG G+ H           W        +  PDT   G DSHT     +GI  +  G G+ 
Sbjct: 91  PGDGVIHS----------WLNR-----MLLPDTVGTGGDSHTRF--PIGI-SFPAGSGLV 132

Query: 236 AEAAMLG-CPISMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEGVVS-----KFVE 289
           A AA  G  P+ M  PE V     G +Q G+T  DLV  I     ++G+++     K   
Sbjct: 133 AFAAATGVMPLDM--PESVLVRFKGKMQPGITLRDLVNAIPYYAIQQGLLTVEKKGKKNV 190

Query: 290 FFGSGFE----SMVLADRA-TIANMAPEYGATCGFFPVDRGT-IDYLRL----------S 333
           F G   E      +  ++A  + + + E  A      +D+   I+YL            +
Sbjct: 191 FNGRILEIEGLPDLKVEQAFELTDASAERSAAACTVRLDKEPVIEYLESNVVLMKIMIAN 250

Query: 334 GRSNS-----RVDLVEAYTKVQGMWREDIDYEKVAFTKKMKLDLGNVS-PSVAGPRRPES 387
           G  ++     R+  +E +     +   D D E  A    +++DL ++  P +A P  P+ 
Sbjct: 251 GYDDARTLLRRIIAMEEWLANPPLLEPDADAEYAA---VIEIDLDDIKEPILACPNDPDD 307

Query: 388 RLSLSEVPSSFVTEMNEYYKKSHTLDEKYPVKGCDFHLKHGDVAIASITSCTNTFNPSVM 447
              LSEV                 +DE + +  C  ++  G                   
Sbjct: 308 VKLLSEV-------------AGKKIDEVF-IGSCMTNI--GHFRA--------------- 336

Query: 448 IGAGLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGCTTC 507
             A  + R        ++ WV    AP +++ +  L + G        G      GC+ C
Sbjct: 337 --AAKILRGK--EFKPTRLWV----APPTRMDWAILQEEGYYSIFGDAGARTEMPGCSLC 388

Query: 508 IGNSGALKKEISEVIHQKSLVVAGVLSGNRNFEGRISPDVEANYLLSPPLVVAYALAGNV 567
           +GN           +   + V +   +  RNF+ R+    E  YL S  L    AL G +
Sbjct: 389 MGN--------QARVADGATVFS---TSTRNFDNRVGKGAEV-YLGSAELAAVCALLGRI 436