HHsearch alignment for GI: 254780452 and conserved domain: PRK10447

Probab=100.00  E-value=4.7e-39  Score=270.50  Aligned_cols=198  Identities=21%  Similarity=0.344  Sum_probs=160.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999985455666556678764457999999998328432677-77889999987765
Q gi|254780452|r   24 GLRAYMIRVYNLMALGLGVTGIMSFLVNILATTVDPDAASIIINRGVMLTGFGALMYTSPLRWIF-IFAPLGVFIFLNVR  102 (259)
Q Consensus        24 ~lr~Fi~kVY~~la~~L~iT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~l~l~~~~~~~  102 (259)
T Consensus        16 ~tNkvLRNTY~LLaltl~fsa~~A~~sm~~~~--------------------------~~~~~~~~l~~~~gllf~~~k-   68 (219)
T PRK10447         16 STHKVLRNTYFLLSLTLAFSAITATASTVLML--------------------------PSPGLILTLVGMYGLMFLTYK-   68 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------------CHHHHHHHHHHHHHHHHHHHH-
T ss_conf             99799999999999999999999999998747--------------------------655899999999999999999-


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             40145420123899999998776789999742----17889999999999999999998655555542035789999999
Q gi|254780452|r  103 LHSLSAYAAKMMFLLYSALIGLSLSSFFLVYT----SKSIVQTFFITAASFGSLSLYGYTTKRDLGPIGSFMIMGAFGLF  178 (259)
Q Consensus       103 ~~~~s~~~~~~l~~~f~~~~G~tls~i~~~y~----~~~I~~A~~~Ta~if~~ls~~~~~tk~D~s~~g~~L~~~l~~li  178 (259)
T Consensus        69 --~~ns~~Gi~~~fafTg~mG~~lgPil~~yl~~~~g~iV~~A~~~Ta~iF~~lS~ya~~TKkDfS~mG~fL~~glivli  146 (219)
T PRK10447         69 --TANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVL  146 (219)
T ss_pred             --HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             --852616699999999999998999999997128816999999889999999999998500326555679999999999


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999741366079999999999999999999999999972156765435047999999999999999999999937789
Q gi|254780452|r  179 LLSLVNLFMRSSAIDLTMSAMGLVIFSALTAYDTQKIKEAYSDRYDVAYAERQSVIGALMLYMDFIQIFVHLLRFLGSRR  258 (259)
Q Consensus       179 i~~i~~~F~~s~~~~~~~s~~g~~iFs~~i~yDtQ~I~~~~~~~~~~~~~~~~~I~~Al~LYlDiiNlFl~iL~ilG~rr  258 (259)
T Consensus       147 va~i~niFl~~p~l~laiS~~~vllfsg~IlydT~~Ii~g---------ge~nyI~Atv~LYldi~NLF~sLL~llGi~~  217 (219)
T PRK10447        147 IGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHG---------GETNYIRATVSLYVSLYNIFVSLLSILGFAS  217 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999999985589999999999999999999999999826---------8226999999999999999999999957536


Q ss_pred             C
Q ss_conf             8
Q gi|254780452|r  259 D  259 (259)
Q Consensus       259 ~  259 (259)
T Consensus       218 ~  218 (219)
T PRK10447        218 R  218 (219)
T ss_pred             C
T ss_conf             9