HHsearch alignment for GI: 254780452 and conserved domain: pfam01027
>pfam01027 UPF0005 Uncharacterized protein family UPF0005. The Pfam entry finds members not in the Prosite definition.
Probab=100.00 E-value=1.3e-43 Score=299.85 Aligned_cols=199 Identities=31% Similarity=0.513 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHCC
Q ss_conf 9999999999999999999999998545566655667876445799999999832843267777889999987-765401
Q gi|254780452|r 27 AYMIRVYNLMALGLGVTGIMSFLVNILATTVDPDAASIIINRGVMLTGFGALMYTSPLRWIFIFAPLGVFIFL-NVRLHS 105 (259)
Q Consensus 27 ~Fi~kVY~~la~~L~iT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~l~~~~-~~~~~~ 105 (259)
T Consensus 1 ~flrKVY~~l~~~ll~Ta~~a~~~~~~--~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~~~~~ 57 (203)
T pfam01027 1 KVLRKTYALLALTLLLTAAGAYVSMAL--LLPFMA---------------------GGPLLSLIGFLGLLFFLLAAPRNS 57 (203)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 905899999999999999999999898--899998---------------------708999999999999999999877
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH
Q ss_conf 4542012389999999877678999974--2178899999999999999999986555-555420357899999999999
Q gi|254780452|r 106 LSAYAAKMMFLLYSALIGLSLSSFFLVY--TSKSIVQTFFITAASFGSLSLYGYTTKR-DLGPIGSFMIMGAFGLFLLSL 182 (259)
Q Consensus 106 ~s~~~~~~l~~~f~~~~G~tls~i~~~y--~~~~I~~A~~~Ta~if~~ls~~~~~tk~-D~s~~g~~L~~~l~~lii~~i 182 (259)
T Consensus 58 ~~~~~~~~ll~~ft~~~G~~l~~~~~~~~~~~~iI~~A~~~T~~if~~ls~~a~~tk~~d~s~lg~~L~~~l~~lii~~i 137 (203)
T pfam01027 58 KNSPKGLLLLFAFTFFMGLTLGPLLNFYLANPSIVMTALGGTAAIFGGLSAYALTAKKRDFSFLGGFLFAGLIVLIVASL 137 (203)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 43458999999999999999999999996571899999999999999999999996434375578999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 97413660799999999999999999999999999721567654350479999999999999999999999377
Q gi|254780452|r 183 VNLFMRSSAIDLTMSAMGLVIFSALTAYDTQKIKEAYSDRYDVAYAERQSVIGALMLYMDFIQIFVHLLRFLGS 256 (259)
Q Consensus 183 ~~~F~~s~~~~~~~s~~g~~iFs~~i~yDtQ~I~~~~~~~~~~~~~~~~~I~~Al~LYlDiiNlFl~iL~ilG~ 256 (259)
T Consensus 138 ~~~f~~s~~~~~~~s~~g~~iF~~~i~yDtq~i~~~~--------~~~d~i~~Al~LYlD~inlF~~iL~ilG~ 203 (203)
T pfam01027 138 ANIFFQSPALQLAISYGGLLLFSGFILYDTQNIIKRG--------GETDYIMAAVSLYLDFINLFVRLLQILGI 203 (203)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999841999999999999999999999999999866--------96069999999999999999999998394