HHsearch alignment for GI: 254780453 and conserved domain: COG0106

>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism].
Probab=93.72  E-value=0.2  Score=29.64  Aligned_cols=134  Identities=20%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             HHHHHHHCCCCCEEEEEECC----CHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf             98776521567508997246----04677776530235531046664147776887652012104887654454211024
Q gi|254780453|r   80 TAAIEHIANMGVAMLTVHAY----PQTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIG  155 (238)
Q Consensus        80 ~~~v~~~~~~g~d~iTvH~~----~~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g  155 (238)
T Consensus        87 ~~~v~~ll~~G~~rViiGt~av~~p~~v~~~~~~~g~--rivv~---lD~r~g~v-av~GW~e~s~~~~~~l~~~~~~~g  160 (241)
T COG0106          87 LEDVEALLDAGVARVIIGTAAVKNPDLVKELCEEYGD--RIVVA---LDARDGKV-AVSGWQEDSGVELEELAKRLEEVG  160 (241)
T ss_pred             HHHHHHHHHCCCCEEEEECCEECCHHHHHHHHHHCCC--CEEEE---EECCCCCC-CCCCCHHCCCCCHHHHHHHHHHCC
T ss_conf             9999999987998899803121699999999998598--28999---97148853-204610125678999999998578


Q ss_pred             CCCCCC---------CCHHH---HHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHC-CCCEEEECCHHCCCC-
Q ss_conf             431113---------41034---4554420244035510113578657984003698999965-998999985330888-
Q gi|254780453|r  156 MGGIVC---------SPQEV---RMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKY-GASHIVVSRPIVRAA-  221 (238)
Q Consensus       156 ~~GvV~---------s~~ei---~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~-GaD~iVVGR~I~~a~-  221 (238)
T Consensus       161 ~~~ii~TdI~~DGtl~G~n~~l~~~l~~~~-~ipviaSGGv~s----~~Di------~~l~~~~G~~GvIvG~ALy~g~~  229 (241)
T COG0106         161 LAHILYTDISRDGTLSGPNVDLVKELAEAV-DIPVIASGGVSS----LDDI------KALKELSGVEGVIVGRALYEGKF  229 (241)
T ss_pred             CCEEEEEECCCCCCCCCCCHHHHHHHHHHH-CCCEEEECCCCC----HHHH------HHHHHCCCCCEEEEEHHHHCCCC
T ss_conf             776999851446645777879999999982-767898668687----9999------99985579728998668964897


Q ss_pred             CHHHHHHHH
Q ss_conf             889999999
Q gi|254780453|r  222 DPVSAAQEF  230 (238)
Q Consensus       222 dP~~aa~~i  230 (238)
T Consensus       230 ~l~ea~~~~  238 (241)
T COG0106         230 TLEEALACV  238 (241)
T ss_pred             CHHHHHHHH
T ss_conf             899999998