HHsearch alignment for GI: 254780453 and conserved domain: PRK03220
>PRK03220 consensus.
Probab=94.71 E-value=0.32 Score=28.28 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=74.7
Q ss_pred HHHHHHCCCCCEEEEEECC----CHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHC-------CCCHHHHHHHHHH
Q ss_conf 8776521567508997246----0467777653023553104666414777688765201-------2104887654454
Q gi|254780453|r 81 AAIEHIANMGVAMLTVHAY----PQTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGY-------EKDISDMVRMRAV 149 (238)
Q Consensus 81 ~~v~~~~~~g~d~iTvH~~----~~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~-------~~~~~~~v~~~a~ 149 (238)
T Consensus 88 e~~~~ll~~GadkVvigs~a~~~p~~~~~~~~~fG~q-~Iv~siD~k~~~~~~~~~~~g~~v~~~g~~~~t~~~~~~~i~ 166 (257)
T PRK03220 88 EDVDSLLRAGADKVSVNTAAIARPELLAELARRFGSQ-CIVLSVDARRVPVGSAPTPSGFEVTTHGGRRGTGIDAVEWAA 166 (257)
T ss_pred HHHHHHHHCCCCEEECHHHHHHCCHHHHHHHHHCCCE-EEEEEEEEEECCCCCCCCCCCEEEEECCCEEECCCCHHHHHH
T ss_conf 9999999819750872066775947778999870986-699999988625677434687499972882602875999999
Q ss_pred HHHHCCCCCCCC---------CCHHH---HHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHH
Q ss_conf 211024431113---------41034---455442024403551011357865798400369899996599899998533
Q gi|254780453|r 150 QARDIGMGGIVC---------SPQEV---RMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPI 217 (238)
Q Consensus 150 ~a~~~g~~GvV~---------s~~ei---~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I 217 (238)
T Consensus 167 ~~~~~g~geil~tdI~rDGt~~G~d~~l~~~i~~~~-~~piIasGGv~s~~----d------i~~l~~~g~~gv~~g~a~ 235 (257)
T PRK03220 167 RGAELGVGEILLNSMDADGTKAGFDLEMLRAVRAAV-TVPVIASGGAGAVE----H------FAPAVAAGADAVLAASVF 235 (257)
T ss_pred HHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHC-CCCEEEECCCCCHH----H------HHHHHHCCCCEEEEHHHH
T ss_conf 986269888999988686602378969999999748-99989987899999----9------999997899799874687
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 0888889999999998
Q gi|254780453|r 218 VRAADPVSAAQEFQRA 233 (238)
Q Consensus 218 ~~a~dP~~aa~~i~~~ 233 (238)
T Consensus 236 ~~~~~s~~~~k~~l~~ 251 (257)
T PRK03220 236 HFGELTIGQVKAALAA 251 (257)
T ss_pred HCCCCCHHHHHHHHHH
T ss_conf 8899889999999998