HHsearch alignment for GI: 254780453 and conserved domain: PRK13116
>PRK13116 consensus.
Probab=96.72 E-value=0.052 Score=33.41 Aligned_cols=184 Identities=16% Similarity=0.174 Sum_probs=97.6
Q ss_pred EEEECCCHHHHHHHHHHH-CCCCCEEEECHHHHH--CCCHHHHH----HHHHHCH---HHHH---H-HHH-CCHH-----
Q ss_conf 996079989999999973-885228998689984--25589999----9985154---6678---7-764-0424-----
Q gi|254780453|r 17 VGLDLPTVKEAERIVSIL-SDTVSFYKIGYHLSF--SGGLELAR----DLISDGK---SVFL---D-MKL-FDIG----- 76 (238)
Q Consensus 17 vALD~~~~~e~l~l~~~l-~~~i~~iKig~~l~~--~~G~~~i~----~l~k~~~---~If~---D-~K~-~DIp----- 76 (238)
T Consensus 23 itaG~P~~~~s~~~l~~l~~~GaDiiElGiPFSDP~ADGPvIQ~A~~rAL~-~G~~~~~~~~~v~~ir~~~~~~PivlM~ 101 (278)
T PRK13116 23 IMLSDPSPEEAFQIISTAIEAGADALELGVPFSDPVADGPTVAESHLRALD-GGATVDSALEQIKRVRAAYPEVPIGMLI 101 (278)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 548489989999999999966999999799988856668999999999997-6986789999999840358987689980
Q ss_pred --HHH-----HHHHHHHCCCCCEEEEEECCC-HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf --678-----987765215675089972460-467777653023553104666414777688765201210488765445
Q gi|254780453|r 77 --SSV-----TAAIEHIANMGVAMLTVHAYP-QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRA 148 (238)
Q Consensus 77 --nTv-----~~~v~~~~~~g~d~iTvH~~~-~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a 148 (238)
T Consensus 102 Y~N~i~~~G~e~F~~~~~~aGvdGlIipDLP~eE~~~~~~~~~~~~i~~I~l~~-ptt~~~ri~~I~------~~s~GFi 174 (278)
T PRK13116 102 YGNVPFTRGLDRFYQEFAEAGADSILLPDVPVREGAPFSAAAAAAGIDPIYIAP-ANASEKTLEGVS------AASKGYI 174 (278)
T ss_pred CCCHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHH------HHCCCEE
T ss_conf 572887727999999997769758994699978889999999865766699937-999599999999------7189739
Q ss_pred HHHHHCCCCCC--CCCCH----HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCC
Q ss_conf 42110244311--13410----3445544202440355101135786579840036989999659989999853308
Q gi|254780453|r 149 VQARDIGMGGI--VCSPQ----EVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVR 219 (238)
Q Consensus 149 ~~a~~~g~~Gv--V~s~~----ei~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~ 219 (238)
T Consensus 175 Y~VS~~GvTG~~~~~~~~~l~~~i~~ik~~t-~~Pv~--vGFGIs~~e---~-----v~~~~~~~aDGVIVGSAiVk 240 (278)
T PRK13116 175 YAISRDGVTGTERESSTDGLSAVVDNIKKFD-GAPIL--LGFGISSPQ---H-----VADAIAAGASGAITGSAITK 240 (278)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCEE--EECCCCCHH---H-----HHHHHHCCCCEEEECHHHHH
T ss_conf 9986352226886666789999999998457-99879--981679899---9-----99998668999998779999