HHsearch alignment for GI: 254780453 and conserved domain: TIGR01740
>TIGR01740 pyrF orotidine 5'-phosphate decarboxylase; InterPro: IPR014732 Orotidine 5'-phosphate decarboxylase (OMPdecase) (4.1.1.23 from EC) , catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional proteins. Some parts of the sequence of OMPdecase are well conserved across species. The best conserved region is located in the N-terminal half of OMPdecases and is centred around a lysine residue which is essential for the catalytic function of the enzyme..
Probab=100.00 E-value=0 Score=400.81 Aligned_cols=216 Identities=36% Similarity=0.549 Sum_probs=204.6
Q ss_pred EEEEEECCCHHHHHHHHHHHCCCCC--EEEECHHHHHCCC-HHHHHHHHH----HCHHHHHHHHHCCHHHHHHHHHHH--
Q ss_conf 8999607998999999997388522--8998689984255-899999985----154667877640424678987765--
Q gi|254780453|r 15 LVVGLDLPTVKEAERIVSILSDTVS--FYKIGYHLSFSGG-LELARDLIS----DGKSVFLDMKLFDIGSSVTAAIEH-- 85 (238)
Q Consensus 15 livALD~~~~~e~l~l~~~l~~~i~--~iKig~~l~~~~G-~~~i~~l~k----~~~~If~D~K~~DIpnTv~~~v~~-- 85 (238)
T Consensus 1 L~vALD~~~~~e~l~~a~~~~~~~~v~~~Kvg~~l~~~~~~~~~~~~L~~~~~KHNf~if~D~Kf~DIpnTv~~~~~~G~ 80 (233)
T TIGR01740 1 LIVALDVTTKEEALKLADSLGPEIDVLVIKVGIDLLLSGGYEKIIEELAKLNKKHNFLIFLDLKFADIPNTVKLQYESGV 80 (233)
T ss_pred CEEECCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCEECCCCHHHHHHHHCCC
T ss_conf 96862389989999999750462777777514233332784889999999745688203212031366156899975086
Q ss_pred -HCCCCCEEEEEECCCH--HHHHHHHHHCCC---CCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf -2156750899724604--677776530235---5310466641477768876520121048876544542110244311
Q gi|254780453|r 86 -IANMGVAMLTVHAYPQ--TMRSAVSVVRDT---GICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGGI 159 (238)
Q Consensus 86 -~~~~g~d~iTvH~~~~--~l~~~~~~~~~~---~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~Gv 159 (238)
T Consensus 81 y~~~~~~~~~~vH~~~G~~~~~~~~~~a~~~~~~~~~ll~V~~ltS~g~~d~-~~~~~~~~~~~~~~~A~~~~~~Gl~G~ 159 (233)
T TIGR01740 81 YKIKQGADMVNVHGVAGKESVEAAKEAASEFSTSGRGLLAVTELTSKGSEDL-ELEYGEDTEEKVVEIAKEAKEFGLIGP 159 (233)
T ss_pred CEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHH-HHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 4121774589972015078999999870256666873799987517981338-999888899999999861666533210
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCC-CCCCCCCEECCHHHHHHCCCCEEEECCHHCC-CCCHHHHHHHHH
Q ss_conf 13410344554420244035510113578-6579840036989999659989999853308-888899999999
Q gi|254780453|r 160 VCSPQEVRMVREIVGHNMVIVTPGIRMLG-SATDGQKRFATPETALKYGASHIVVSRPIVR-AADPVSAAQEFQ 231 (238)
Q Consensus 160 V~s~~ei~~ir~~~~~~~~~itPGI~~~~-~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~-a~dP~~aa~~i~ 231 (238)
T Consensus 160 ~~~~~~~~~~~~~~G~~~~~~tPGir~~~~g~~~dQ~~~~~~~~a~~~g~D~iiVGR~Iy~~~~dP~~aa~~i~ 233 (233)
T TIGR01740 160 VCSAEEAKEIRKITGSDFLILTPGIRLASKGDADDQQRVVTLEDAIEAGADVIIVGRGIYKKAEDPVEAAKKIR 233 (233)
T ss_pred ECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHCCCCCHHHHHHHCC
T ss_conf 11467786563205887078607714898887888644377899986049989987821013878689998609