HHsearch alignment for GI: 254780453 and conserved domain: TIGR02127
>TIGR02127 pyrF_sub2 orotidine 5'-phosphate decarboxylase; InterPro: IPR011995 Orotidine 5'-phosphate decarboxylase (OMPdecase) , catalyzes the last step in the de novo biosynthesis of pyrimidines, the decarboxylation of OMP into UMP. In higher eukaryotes OMPdecase is part, with orotate phosphoribosyltransferase, of a bifunctional enzyme, while the prokaryotic and fungal OMPdecases are monofunctional protein. Some parts of the sequence of OMPdecase are well conserved across species. The best conserved region is located in the N-terminal half of OMPdecases and is centred around a lysine residue which is essential for the catalytic function of the enzyme. This entry represents orotidine 5'-monophosphate decarboxylase, the PyrF protein of pyrimidine nucleotide biosynthesis.; GO: 0004590 orotidine-5'-phosphate decarboxylase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=99.80 E-value=7.4e-19 Score=142.42 Aligned_cols=213 Identities=25% Similarity=0.290 Sum_probs=158.0
Q ss_pred CCCCCEEEEEECC----------CHH-------------HHHHHHHHHCCCCCEEEECHHHHHCCCHHHHHHHH------
Q ss_conf 5789889996079----------989-------------99999997388522899868998425589999998------
Q gi|254780453|r 10 DEKKRLVVGLDLP----------TVK-------------EAERIVSILSDTVSFYKIGYHLSFSGGLELARDLI------ 60 (238)
Q Consensus 10 ~kk~~livALD~~----------~~~-------------e~l~l~~~l~~~i~~iKig~~l~~~~G~~~i~~l~------ 60 (238)
T Consensus 11 ~~~s~lCvGLDP~~~~l~~~~~~~~~~~~~~~~A~~~~~Fc~~iiDA~a~~~a~vKPq~AFFE~~G~~G~~~L~evi~~~ 90 (306)
T TIGR02127 11 AKRSPLCVGLDPRLELLPEWVKESEARKKKESVAAGLAAFCKRIIDATAEYAAVVKPQVAFFEAFGSEGFKALEEVIAHA 90 (306)
T ss_pred HCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCHHHHHHHHHHHHHH
T ss_conf 54897899656985762254111422222447889999988999986426331440460011112767899999999997
Q ss_pred -HHC--HHHHHHHHHCCHHHHHHHHHHHHCC--------CCCEEEEEECC-C-HHHHHHHHHHCCCCCCEEEEEEECC-C
Q ss_conf -515--4667877640424678987765215--------67508997246-0-4677776530235531046664147-7
Q gi|254780453|r 61 -SDG--KSVFLDMKLFDIGSSVTAAIEHIAN--------MGVAMLTVHAY-P-QTMRSAVSVVRDTGICLLAVTVLTS-M 126 (238)
Q Consensus 61 -k~~--~~If~D~K~~DIpnTv~~~v~~~~~--------~g~d~iTvH~~-~-~~l~~~~~~~~~~~~~il~Vt~LTS-~ 126 (238)
T Consensus 91 ~~~GPq~~V~~D~KRGDIg~Ta~aYA~~~lg~~~~~~S~~~~DA~TvsPYlG~dSL~Pfle~~~~~G~giFvL-v~TSN~ 169 (306)
T TIGR02127 91 KSAGPQLLVLADAKRGDIGSTAEAYAKAYLGHLKADDSPLEADALTVSPYLGLDSLRPFLEVARANGAGIFVL-VKTSNP 169 (306)
T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHCCHHHHHHHHHHHHHCCEEEEE-EEECCC
T ss_conf 4158942688043137677799999999833678898841010245130001033115689897538969999-851685
Q ss_pred CHHHHHHHHCCC------------------CHHHHHHHHHHHHHHC--------CCCCCC---CCCHHHHHHHHH-----
Q ss_conf 768876520121------------------0488765445421102--------443111---341034455442-----
Q gi|254780453|r 127 DDFDLRESGYEK------------------DISDMVRMRAVQARDI--------GMGGIV---CSPQEVRMVREI----- 172 (238)
Q Consensus 127 ~~~~l~~~g~~~------------------~~~~~v~~~a~~a~~~--------g~~GvV---~s~~ei~~ir~~----- 172 (238)
T Consensus 170 ~~~~~Q~~~~~~~qGtfGessGsilsCsgr~vy~~va~~~~~~~~~~~d~~gPY~~~G~VVGAT~P~~l~~lr~~~nlse 249 (306)
T TIGR02127 170 GGADLQDLRVSDRQGTFGESSGSILSCSGRTVYEEVAELAGELNESPGDKSGPYGSVGAVVGATSPEDLKRLREERNLSE 249 (306)
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 53788855540256643345563575077468999999999986315887778521146861388689999877643466
Q ss_pred HCCCCEEEEECCCCCC-CCCCCCCEECCHHHHH-HCCCCEEE-ECCHHCCCCCH-HHHHHH
Q ss_conf 0244035510113578-6579840036989999-65998999-98533088888-999999
Q gi|254780453|r 173 VGHNMVIVTPGIRMLG-SATDGQKRFATPETAL-KYGASHIV-VSRPIVRAADP-VSAAQE 229 (238)
Q Consensus 173 ~~~~~~~itPGI~~~~-~~~~dq~r~~tp~~Ai-~~GaD~iV-VGR~I~~a~dP-~~aa~~ 229 (238)
T Consensus 250 f~p~~~~LvPG~GAQGG~~~~d------l~~~~~~~g~g~l~n~SR~v~~A~~~r~~~~~~ 304 (306)
T TIGR02127 250 FMPTLPFLVPGFGAQGGAEAAD------LEALFDADGSGLLINSSRGVLFAGPRRSSALVA 304 (306)
T ss_pred HHCCCCEECCCCCCCCCCHHHH------HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf 6257714217501138714899------987520256651566545676507870699984