HHsearch alignment for GI: 254780453 and conserved domain: cd00331
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water. IGPS is active as a separate monomer in most organisms, but is also found fused to other enzymes as part of a bifunctional or multifunctional enzyme involved in tryptophan biosynthesis.
Probab=92.07 E-value=0.94 Score=25.27 Aligned_cols=189 Identities=17% Similarity=0.209 Sum_probs=101.1
Q ss_pred CCCCCCCCCCCCEEEE-EECCCHHHHHHHHHHHC-CCCCEEEECHH-HHHCCCHHHHHHHHHH-CHHHHH-HHHHCCHHH
Q ss_conf 4112311578988999-60799899999999738-85228998689-9842558999999851-546678-776404246
Q gi|254780453|r 3 AGLIIDVDEKKRLVVG-LDLPTVKEAERIVSILS-DTVSFYKIGYH-LSFSGGLELARDLISD-GKSVFL-DMKLFDIGS 77 (238)
Q Consensus 3 ~~~~~~~~kk~~livA-LD~~~~~e~l~l~~~l~-~~i~~iKig~~-l~~~~G~~~i~~l~k~-~~~If~-D~K~~DIpn 77 (238)
T Consensus 11 ~~iIaEiKr~SPS~G~i~~~~d~---~~~A~~Y~~~GA~aiSVLTe~~~F~Gs~~~L~~v~~~~~~PiLrKDFI-id--- 83 (217)
T cd00331 11 LGVIAEVKRASPSKGLIREDFDP---VEIAKAYEKAGAAAISVLTEPKYFQGSLEDLRAVREAVSLPVLRKDFI-ID--- 83 (217)
T ss_pred CEEEEEEECCCCCCCCCCCCCCH---HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCC-CC---
T ss_conf 77997622699998856788999---999999997798189995577777988999999998479986742321-76---
Q ss_pred HHHHHHHHHCCCCCEEEEEEC--CC-HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 789877652156750899724--60-467777653023553104666414777688765201210488765445421102
Q gi|254780453|r 78 SVTAAIEHIANMGVAMLTVHA--YP-QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDI 154 (238)
Q Consensus 78 Tv~~~v~~~~~~g~d~iTvH~--~~-~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~ 154 (238)
T Consensus 84 --~~QI~ea~~~GAdaiLLI~~~L~~~~l~~l~~~a~~lgl~~Lv--E--vh~~~El~~a~~~---------------~a 142 (217)
T cd00331 84 --PYQIYEARAAGADAVLLIVAALDDEQLKELYELARELGMEVLV--E--VHDEEELERALAL---------------GA 142 (217)
T ss_pred --HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCEEEE--E--ECCHHHHHHHHHC---------------CC
T ss_conf --9999999981998787988854999999999999994982798--8--5899999999957---------------99
Q ss_pred CCCCC--------CCCCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHH
Q ss_conf 44311--------1341034455442024403551-01135786579840036989999659989999853308888899
Q gi|254780453|r 155 GMGGI--------VCSPQEVRMVREIVGHNMVIVT-PGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVS 225 (238)
Q Consensus 155 g~~Gv--------V~s~~ei~~ir~~~~~~~~~it-PGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~ 225 (238)
T Consensus 143 ~iIGINnRdL~t~~vd~~~~~~L~~~ip~~~~~IsESGI~~~~----------di~~l~~~G~d~~LIG~sLm~~~~p~~ 212 (217)
T cd00331 143 KIIGINNRDLKTFEVDLNTTERLAPLIPKDVILVSESGISTPE----------DVKRLAEAGADAVLIGESLMRAPDPGA 212 (217)
T ss_pred CEEEECCCCCHHCEECHHHHHHHHHHCCCCCEEEECCCCCCHH----------HHHHHHHCCCCEEEECHHHHCCCCHHH
T ss_conf 8784216771230347899999996489898899827999999----------999999879999998978867999899
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780453|r 226 AAQE 229 (238)
Q Consensus 226 aa~~ 229 (238)
T Consensus 213 ~l~~ 216 (217)
T cd00331 213 ALRE 216 (217)
T ss_pred HHHH
T ss_conf 9960