HHsearch alignment for GI: 254780453 and conserved domain: cd03332
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=95.30 E-value=0.026 Score=35.38 Aligned_cols=63 Identities=29% Similarity=0.514 Sum_probs=40.9
Q ss_pred HHHHHHHCCCCCCCCCCH-------------HHHHHHHHHCCCCEE-EEECCCCCCCCCCCCCEECCHHHHHHCCCCEEE
Q ss_conf 454211024431113410-------------344554420244035-510113578657984003698999965998999
Q gi|254780453|r 147 RAVQARDIGMGGIVCSPQ-------------EVRMVREIVGHNMVI-VTPGIRMLGSATDGQKRFATPETALKYGASHIV 212 (238)
Q Consensus 147 ~a~~a~~~g~~GvV~s~~-------------ei~~ir~~~~~~~~~-itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iV 212 (238)
T Consensus 266 DA~~A~~~G~dgIiVSNHGGRQLD~apa~i~~LpeI~~aV~~~~~V~~DgGIRr-G~D---------V~KAlALGA~~V~ 335 (383)
T cd03332 266 DARRAVEAGVDGVVVSNHGGRQVDGSIAALDALPEIVEAVGDRLTVLFDSGVRT-GAD---------IMKALALGAKAVL 335 (383)
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-HHH---------HHHHHHCCCCEEE
T ss_conf 999999759988998078634467883278999999998479984999799786-799---------9999976999898
Q ss_pred ECCHHCC
Q ss_conf 9853308
Q gi|254780453|r 213 VSRPIVR 219 (238)
Q Consensus 213 VGR~I~~ 219 (238)
T Consensus 336 iGRp~l~ 342 (383)
T cd03332 336 IGRPYAY 342 (383)
T ss_pred ECHHHHH
T ss_conf 7789999