HHsearch alignment for GI: 254780453 and conserved domain: cd04729
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=93.08 E-value=0.34 Score=28.15 Aligned_cols=170 Identities=21% Similarity=0.345 Sum_probs=89.6
Q ss_pred CCCCCEEEEEECC------CHHHHHHHHHH-HCCCCCEEEECHHHHHCCCHHHHHHHHHH-CHHHHHHHHHC--C----H
Q ss_conf 5789889996079------98999999997-38852289986899842558999999851-54667877640--4----2
Q gi|254780453|r 10 DEKKRLVVGLDLP------TVKEAERIVSI-LSDTVSFYKIGYHLSFSGGLELARDLISD-GKSVFLDMKLF--D----I 75 (238)
Q Consensus 10 ~kk~~livALD~~------~~~e~l~l~~~-l~~~i~~iKig~~l~~~~G~~~i~~l~k~-~~~If~D~K~~--D----I 75 (238)
T Consensus 6 ~lkg~LIVSCQA~~~ePl~~~~im~~mA~Aa~~gGA~giR~~-------~~~dI~aIk~~v~lPIIGi~K~~~~~s~VyI 78 (219)
T cd04729 6 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRAN-------GVEDIRAIRARVDLPIIGLIKRDYPDSEVYI 78 (219)
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC-------CHHHHHHHHHCCCCCEEEEEECCCCCCCEEE
T ss_conf 756997999618988996877899999999997896399808-------9889999983289988999956889998456
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECC----C--HHHHHHHHHHCCC-CCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 467898776521567508997246----0--4677776530235-53104666414777688765201210488765445
Q gi|254780453|r 76 GSSVTAAIEHIANMGVAMLTVHAY----P--QTMRSAVSVVRDT-GICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRA 148 (238)
Q Consensus 76 pnTv~~~v~~~~~~g~d~iTvH~~----~--~~l~~~~~~~~~~-~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a 148 (238)
T Consensus 79 TPt~-~ev~~l~~aGadiIA~DaT~R~RP~g~~l~~~i~~i~~~~~~l~MAD--~st--------------~e-----e~ 136 (219)
T cd04729 79 TPTI-EEVDALAAAGADIIALDATDRPRPDGETLAELIKRIHEEYNCLLMAD--IST--------------LE-----EA 136 (219)
T ss_pred CCCH-HHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEE--CCC--------------HH-----HH
T ss_conf 6889-99999998599999994678879899789999999999869778875--488--------------99-----99
Q ss_pred HHHHHCCCC-------CCC-----CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHH---HHHCCCCEEEE
Q ss_conf 421102443-------111-----341034455442024403551011357865798400369899---99659989999
Q gi|254780453|r 149 VQARDIGMG-------GIV-----CSPQEVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPET---ALKYGASHIVV 213 (238)
Q Consensus 149 ~~a~~~g~~-------GvV-----~s~~ei~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~---Ai~~GaD~iVV 213 (238)
T Consensus 137 ~~A~~~G~D~vgTTL~GYT~~t~~~~~PD~~lv~~l~~~-~--~~pvI-aEG-------ri~tPe~a~~a~~~GA~aVVV 205 (219)
T cd04729 137 LNAAKLGFDIIGTTLSGYTEETAKTEDPDFELLKELRKA-L--GIPVI-AEG-------RINSPEQAAKALELGADAVVV 205 (219)
T ss_pred HHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-C--CCCEE-EEC-------CCCCHHHHHHHHHCCCCEEEE
T ss_conf 999984998997021456778788999878999999997-5--99399-706-------989999999999839989998
Q ss_pred CCHHCC
Q ss_conf 853308
Q gi|254780453|r 214 SRPIVR 219 (238)
Q Consensus 214 GR~I~~ 219 (238)
T Consensus 206 GsAITr 211 (219)
T cd04729 206 GSAITR 211 (219)
T ss_pred CCCCCC
T ss_conf 954388