HHsearch alignment for GI: 254780453 and conserved domain: cd04735
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=92.90 E-value=0.45 Score=27.36 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=69.0
Q ss_pred HCCHHHHHHH---HHHHHCCCCCEEEEEECCCHH-H--------------------------HHHHHHHC----CC--CC
Q ss_conf 4042467898---776521567508997246046-7--------------------------77765302----35--53
Q gi|254780453|r 72 LFDIGSSVTA---AIEHIANMGVAMLTVHAYPQT-M--------------------------RSAVSVVR----DT--GI 115 (238)
Q Consensus 72 ~~DIpnTv~~---~v~~~~~~g~d~iTvH~~~~~-l--------------------------~~~~~~~~----~~--~~ 115 (238)
T Consensus 136 ~~eI~~ii~~f~~AA~rA~~AGfDgVEiH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~vg~~~~~d 215 (353)
T cd04735 136 HEEIEDIIDAFGEATRRAIEAGFDGVEIHGANGYLIQQFFSPHSNRRTDEWGGSLENRMRFPLAVVKAVQEVIDKHADKD 215 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999998399989975465759998539988998473679889998899999999999854005897
Q ss_pred CEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH---------------HHHHHHHHHCC-CCEE
Q ss_conf 1046664147776887652012104887654454211024431113410---------------34455442024-4035
Q gi|254780453|r 116 CLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGGIVCSPQ---------------EVRMVREIVGH-NMVI 179 (238)
Q Consensus 116 ~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~GvV~s~~---------------ei~~ir~~~~~-~~~~ 179 (238)
T Consensus 216 f~vgv----Ris~~e~~~~G~~--~~e~-~~~~~~l~~~gvD~l~vs~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvi 288 (353)
T cd04735 216 FILGY----RFSPEEPEEPGIR--MEDT-LALVDKLADKGLDYLHISLWDFDRKSRRGRDDNQTIMELVKERIAGRLPLI 288 (353)
T ss_pred CEEEE----ECCHHHCCCCCCC--HHHH-HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
T ss_conf 33675----1586541479999--9999-999999984799889960377667776677753558999999967898099
Q ss_pred EEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHHHHH
Q ss_conf 5101135786579840036989999659989999853308888899999
Q gi|254780453|r 180 VTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQ 228 (238)
Q Consensus 180 itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~aa~ 228 (238)
T Consensus 289 ~~G~i~~~~----------~ae~~l~~gaD~V~~gR~liadPd~~~K~~ 327 (353)
T cd04735 289 AVGSINTPD----------DALEALETGADLVAIGRGLLVDPDWVEKIK 327 (353)
T ss_pred EECCCCCHH----------HHHHHHHCCCCHHHHHHHHHHCHHHHHHHH
T ss_conf 989999899----------999999869982998699997931999998