HHsearch alignment for GI: 254780453 and conserved domain: cd04737
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain. LOX is a member of the family of FMN-containing alpha-hydroxyacid oxidases and catalyzes the oxidation of l-lactate using molecular oxygen to generate pyruvate and H2O2. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=95.30 E-value=0.028 Score=35.17 Aligned_cols=61 Identities=33% Similarity=0.464 Sum_probs=40.2
Q ss_pred HHHHHHCCCCCCCCCCH-------------HHHHHHHHHCCCCE-EEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEE
Q ss_conf 54211024431113410-------------34455442024403-55101135786579840036989999659989999
Q gi|254780453|r 148 AVQARDIGMGGIVCSPQ-------------EVRMVREIVGHNMV-IVTPGIRMLGSATDGQKRFATPETALKYGASHIVV 213 (238)
Q Consensus 148 a~~a~~~g~~GvV~s~~-------------ei~~ir~~~~~~~~-~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVV 213 (238)
T Consensus 235 A~~A~~~G~dgIvVSNHGGRQLD~~p~~i~~LpeI~~av~~~~~V~~DgGIR~-G~D---------V~KALALGA~aV~i 304 (351)
T cd04737 235 ADVAINAGADGIWVSNHGGRQLDGGPASFDSLPEIAEAVNHRVPIIFDSGVRR-GEH---------VFKALASGADAVAV 304 (351)
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC-HHH---------HHHHHHCCCCEEEE
T ss_conf 99998749988997787512356760478899999998668964997698674-689---------99999769988975
Q ss_pred CCHHC
Q ss_conf 85330
Q gi|254780453|r 214 SRPIV 218 (238)
Q Consensus 214 GR~I~ 218 (238)
T Consensus 305 GRp~l 309 (351)
T cd04737 305 GRPVL 309 (351)
T ss_pred CHHHH
T ss_conf 78999