HHsearch alignment for GI: 254780453 and conserved domain: pfam05690
>pfam05690 ThiG Thiazole biosynthesis protein ThiG. This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway.
Probab=96.84 E-value=0.048 Score=33.63 Aligned_cols=192 Identities=23% Similarity=0.336 Sum_probs=113.3
Q ss_pred CCCCCEEEEEE-CCCHHHHHHHHHHHCCCCCEEEECHHHHHC-CCHHHHHHHHHHCHHHHHHHHHCCHHHHH-----HHH
Q ss_conf 57898899960-799899999999738852289986899842-55899999985154667877640424678-----987
Q gi|254780453|r 10 DEKKRLVVGLD-LPTVKEAERIVSILSDTVSFYKIGYHLSFS-GGLELARDLISDGKSVFLDMKLFDIGSSV-----TAA 82 (238)
Q Consensus 10 ~kk~~livALD-~~~~~e~l~l~~~l~~~i~~iKig~~l~~~-~G~~~i~~l~k~~~~If~D~K~~DIpnTv-----~~~ 82 (238)
T Consensus 6 ~f~SRL~lGTgky~s~~~~~~ai~aSg~eivTVAlRR~~~~~~~~~~~l~~i~~~~~~--------iLPNTAGc~tA~EA 77 (246)
T pfam05690 6 TFDSRLLLGTGKYPSPEVLKEAIRASGAEIVTVALRRVNAGQPGGENFLDLLDWLGIT--------LLPNTAGCRTAEEA 77 (246)
T ss_pred EEECCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCE--------ECCCCCCCCCHHHH
T ss_conf 8674447873899999999999999689779989863058888842588864133866--------77763011889999
Q ss_pred HH------HHCCCCCEEEEE--EC-----CC---HHHHHHHHHHCCCCCCEEEEEEECCCCH---HHHHHHHCCCCHHHH
Q ss_conf 76------521567508997--24-----60---4677776530235531046664147776---887652012104887
Q gi|254780453|r 83 IE------HIANMGVAMLTV--HA-----YP---QTMRSAVSVVRDTGICLLAVTVLTSMDD---FDLRESGYEKDISDM 143 (238)
Q Consensus 83 v~------~~~~~g~d~iTv--H~-----~~---~~l~~~~~~~~~~~~~il~Vt~LTS~~~---~~l~~~g~~~~~~~~ 143 (238)
T Consensus 78 Vr~A~laRE~~--~t~wIKLEVi~D~~~LlPD~~etl~Aae~Lv~e-GF~Vl---pY~~~D~v~akrLed~Gc~avMP-- 149 (246)
T pfam05690 78 VRTARLAREAF--GTNWIKLEVIGDSKTLLPDPIETLKAAEILVKE-GFTVL---PYTTDDPVLARRLEEAGCAAVMP-- 149 (246)
T ss_pred HHHHHHHHHHC--CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC-CCEEE---EECCCCHHHHHHHHHCCCEEEEE--
T ss_conf 99999999970--997489998269887798878999999999978-99898---86179989999998759849862--
Q ss_pred HHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCC
Q ss_conf 654454211024-4311134103445544202440355101135786579840036989999659989999853308888
Q gi|254780453|r 144 VRMRAVQARDIG-MGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAAD 222 (238)
Q Consensus 144 v~~~a~~a~~~g-~~GvV~s~~ei~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~d 222 (238)
T Consensus 150 ------lgsPIGSg~Gl~-n~~~l~~i~e~~-~vPvIVDAGiG~pS~----------Aa~aMElG~DaVLvNTAIA~A~d 211 (246)
T pfam05690 150 ------LGAPIGSGLGLR-NPENLRIIIEEA-DVPVIVDAGIGTPSD----------AAQAMELGADAVLLNTAIARAKD 211 (246)
T ss_pred ------CCCCCCCCCCCC-CHHHHHHHHHHC-CCCEEEECCCCCHHH----------HHHHHHCCCCEEEHHHHHHCCCC
T ss_conf ------244013688868-999999999967-998898489896788----------99999745677773067773799
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 8999999999866
Q gi|254780453|r 223 PVSAAQEFQRAIS 235 (238)
Q Consensus 223 P~~aa~~i~~~i~ 235 (238)
T Consensus 212 Pv~MA~A~~~Av~ 224 (246)
T pfam05690 212 PVAMARAFKLAVE 224 (246)
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999999999999