RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddB
21,608 sequences; 5,994,473 total letters
Searching..................................................done
Query= gi|254780453|ref|YP_003064866.1| orotidine 5'-phosphate
decarboxylase [Candidatus Liberibacter asiaticus str. psy62]
(238 letters)
>gnl|CDD|178939 PRK00230, PRK00230, orotidine 5'-phosphate decarboxylase; Reviewed.
Length = 230
Score = 271 bits (696), Expect = 1e-73
Identities = 93/225 (41%), Positives = 131/225 (58%), Gaps = 3/225 (1%)
Query: 13 KRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKL 72
RL+V LD P+ +EA + L V F K+G L +GG + R+L G VFLD+KL
Sbjct: 3 DRLIVALDFPSKEEALAFLDQLDPAVLFVKVGMELFTAGGPQFVRELKQRGFKVFLDLKL 62
Query: 73 FDIGSSVTAAIEHIANMGVAMLTVHAY--PQTMRSAVSVVRD-TGICLLAVTVLTSMDDF 129
DI ++V A+ +A +GV M+ VHA P+ M++A + + L+AVTVLTSMD+
Sbjct: 63 HDIPNTVAKAVRALAKLGVDMVNVHASGGPRMMKAAREALEPKSRPLLIAVTVLTSMDEE 122
Query: 130 DLRESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGS 189
DL E G + + V A A++ G+ G+VCS QE +RE G + ++VTPGIR GS
Sbjct: 123 DLAELGINLSLEEQVLRLAKLAQEAGLDGVVCSAQEAAAIREATGPDFLLVTPGIRPAGS 182
Query: 190 ATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234
QKR TP A+ G+ +IVV RPI +AADP +A + I
Sbjct: 183 DAGDQKRVMTPAQAIAAGSDYIVVGRPITQAADPAAAYEAILAEI 227
>gnl|CDD|162513 TIGR01740, pyrF, orotidine 5'-phosphate decarboxylase, subfamily 1.
This model represents orotidine 5'-monophosphate
decarboxylase, the PyrF protein of pyrimidine nucleotide
biosynthesis. In many eukaryotes, the region hit by this
model is part of a multifunctional protein.
Length = 213
Score = 184 bits (468), Expect = 2e-47
Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 15 LVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKLFD 74
L+V LD+ T EA + L + K+G L GG ++ +L K +FLD+K D
Sbjct: 1 LIVALDVTTKDEALDLADSLGPEIEVIKVGIDLLLDGGDKIIDELAKLNKLIFLDLKFAD 60
Query: 75 IGSSVTAAIEHIANMGVAMLTVHAYP--QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLR 132
I ++V E G M+ VH +++ +A + G LLAVT LTSM D
Sbjct: 61 IPNTVKLQYESKIKQGADMVNVHGVAGSESVEAAKEAASEGGRGLLAVTELTSMGSLDYG 120
Query: 133 ESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGSATD 192
E EK ++ A +A+ G+ G VCS +E + +R+ G + +I+TPGIR+ D
Sbjct: 121 EDTMEK----VLEY-AKEAKAFGLDGPVCSAEEAKEIRKFTG-DFLILTPGIRLQSKGAD 174
Query: 193 GQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQ 231
Q+R T E A + GA I+V R I A DPV AA+ +
Sbjct: 175 DQQRVVTLEDAKEAGADVIIVGRGIYAAEDPVEAAKRIR 213
>gnl|CDD|184343 PRK13813, PRK13813, orotidine 5'-phosphate decarboxylase;
Provisional.
Length = 215
Score = 114 bits (288), Expect = 2e-26
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 12 KKRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMK 71
R+++ LD+ + A +I L D V K+G+ L + GL + +L V D+K
Sbjct: 3 DSRIILALDVTDRERALKIAEELDDYVDAIKVGWPLVLASGLGIIEELKRYAP-VIADLK 61
Query: 72 LFDIGSSVTAAIEHIANMGVAMLTVHAYP--QTMRSAVSVVRDTGICLLAVTVLTSMDDF 129
+ DI ++ E + G + VH + ++++ V ++G + V ++
Sbjct: 62 VADIPNTNRLICEAVFEAGAWGIIVHGFTGRDSLKAVVEAAAESGGKVFVVVEMS----- 116
Query: 130 DLRESGYEKDISDMVRMRAVQARDIGMGGIVCS---PQEVRMVREIVGHNMVIVTPGIRM 186
G + I A A++ G G+V P+ VR +R +G + I++PGI
Sbjct: 117 ---HPGALEFIQPHADKLAKLAQEAGAFGVVAPATRPERVRYIRSRLGDELKIISPGIGA 173
Query: 187 LGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAISLI 237
G A+K GA +++V R I AADP AA+ I
Sbjct: 174 QG---------GKAADAIKAGADYVIVGRSIYNAADPREAAKAINEEIRGA 215
>gnl|CDD|162717 TIGR02127, pyrF_sub2, orotidine 5'-phosphate decarboxylase,
subfamily 2. This model represents orotidine
5'-monophosphate decarboxylase, the PyrF protein of
pyrimidine nucleotide biosynthesis. See TIGR01740 for a
related but distinct subfamily of the same enzyme.
Length = 261
Score = 36.6 bits (85), Expect = 0.006
Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 47/254 (18%)
Query: 12 KKRLVVGLD----------LPTVKEA-----ERIVSILSDTVSFYKIGYHLSF-----SG 51
+ L VGLD LP+ RI+ ++ + K ++F S
Sbjct: 13 RSPLCVGLDPRLELLPEWGLPSSAAGLQAFCLRIIDATAEYAAVVKP--QVAFFERFGSE 70
Query: 52 GLELARDLISDGKS----VFLDMKLFDIGSSVTA-AIEHIANMGVAMLTVHAY--PQTMR 104
G + ++I+ +S V D+K DIGS+ +A A + ++ LTV Y ++R
Sbjct: 71 GFKALEEVIAHARSLGLPVLADVKRGDIGSTASAYAKAWLGHLHADALTVSPYLGLDSLR 130
Query: 105 SAVSVVRDTGICLLAVTVLTS-MDDFDLRESGYEK------DISDMVRMRAVQARDIGMG 157
+ R G + V V TS DL++ +++++ D
Sbjct: 131 PFLEYARANG-AGIFVLVKTSNPGGADLQDLRVSDGRTVYEEVAELAGELNESPGDCSSV 189
Query: 158 GIV---CSPQEVRMVREIVGHNMVIVTPGIRMLG-SATDGQKRFATPETALKYGASHIVV 213
G V SP ++ +R + + PG G A D + F A G I
Sbjct: 190 GAVVGATSPGDLLRLRIEMPT-APFLVPGFGAQGAEAADLRGLFG----ADGSGLL-INS 243
Query: 214 SRPIVRAADPVSAA 227
SR ++ A SA
Sbjct: 244 SRGVLFAGPRSSAL 257
>gnl|CDD|178817 PRK00043, thiE, thiamine-phosphate pyrophosphorylase; Reviewed.
Length = 212
Score = 33.6 bits (78), Expect = 0.045
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234
TPE A L+ GA + V I A DP +AA+ A
Sbjct: 170 TPENAPEVLEAGADGVAVVSAITGAEDPEAAARALLAAF 208
>gnl|CDD|183964 PRK13307, PRK13307, bifunctional formaldehyde-activating
enzyme/3-hexulose-6-phosphate synthase; Provisional.
Length = 391
Score = 33.4 bits (77), Expect = 0.045
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 46/231 (19%)
Query: 15 LVVGLDLPTVKEAERIVSIL--SDTVSFYKIGYHLSFSGGLELAR----DLISDGKSVF- 67
L V LDLP ++E ER++S L SD H+ G L + ++IS + V
Sbjct: 175 LQVALDLPDLEEVERVLSQLPKSD---------HIIIEAGTPLIKKFGLEVISKIREVRP 225
Query: 68 -----LDMKLFDIGS-SVTAAIEHIANMGVAMLTVHAYPQTMRSAVSVVRDTGICLLAVT 121
D+K D G+ A + A+ V + + A T+ A+ + TGI ++
Sbjct: 226 DAFIVADLKTLDTGNLEARMAADATAD-AVVISGL-APISTIEKAIHEAQKTGI--YSIL 281
Query: 122 VLTSMDDFD--LRESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVI 179
+ +++D L + D+ ++ R + + G I + +++ G +V
Sbjct: 282 DMLNVEDPVKLLESLKVKPDVVELHRGIDEEGTEHAWGNI-------KEIKKAGGKILVA 334
Query: 180 VTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEF 230
V G+R+ E ALK GA +VV R I ++ D AA++F
Sbjct: 335 VAGGVRV-----------ENVEEALKAGADILVVGRAITKSKDVRRAAEDF 374
>gnl|CDD|132172 TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. at the cost
of also yielding formaldehyde. These latter species tend
usually have a formaldehyde-activating enzyme to attach
formaldehyde to the C1 carrier tetrahydromethanopterin.
In these species, the enzyme is viewed as a lyase rather
than a synthase and is called D-arabino 3-hexulose
6-phosphate formaldehyde lyase. Note that there is some
overlap in specificity with the Escherichia coli enzyme
3-keto-L-gulonate 6-phosphate decarboxylase.
Length = 206
Score = 32.0 bits (73), Expect = 0.13
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 15 LVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDL--ISDGKSVFLDMKL 72
L + LDL ++EA + ++D V +IG L + G+E +++ + V D+K
Sbjct: 2 LQLALDLLDIEEALELAEKVADYVDIIEIGTPLIKNEGIEAVKEMKEAFPDRKVLADLKT 61
Query: 73 FDIGS-SVTAAIEHIANMGVAMLTVHAYPQTMRSAVSVVRDTGICLLAVTVLTSMDDFDL 131
D G A A++ V +L V A T++ AV + G + L ++ D
Sbjct: 62 MDAGEYEAEQAFAAGADI-VTVLGV-ADDATIKGAVKAAKKHGKEVQV--DLINVKDKVK 117
Query: 132 RESGYEKDISDMVRMRA---VQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLG 188
R ++ +D + + QA+ G +++V+E V V GI +
Sbjct: 118 RAKELKELGADYIGVHTGLDEQAK--GQNPFEDLQTILKLVKEAR----VAVAGGINL-- 169
Query: 189 SATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234
T +K G ++V I +AADP AA++ ++ I
Sbjct: 170 ---------DTIPDVIKLGPDIVIVGGAITKAADPAEAARQIRKLI 206
>gnl|CDD|178236 PLN02629, PLN02629, powdery mildew resistance 5.
Length = 387
Score = 31.0 bits (70), Expect = 0.24
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 98 AYPQTMRSAVSVVRD--TGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARD 153
AYP MR V+R LL +T+L+ + D S Y D+S R ++ D
Sbjct: 308 AYPDQMRVVDEVIRGMHNPAYLLDITLLSELRK-DGHPSIYSGDLSPSQRANPDRSAD 364
>gnl|CDD|183962 PRK13305, sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase;
Provisional.
Length = 218
Score = 29.0 bits (65), Expect = 1.1
Identities = 56/253 (22%), Positives = 93/253 (36%), Gaps = 68/253 (26%)
Query: 12 KKRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISD--GKSVFLD 69
+ L + LD +++ A+R V++L D V + G L + GL + L K + D
Sbjct: 3 RPLLQLALDHTSLEAAQRDVTLLKDHVDIVEAGTILCLNEGLGAVKALREQCPDKIIVAD 62
Query: 70 MKLFDIGSSVT-AAIEHIANMGVAMLTVHAYP-QTMRSAVSVVRDTG----ICLLAVTVL 123
K+ D G ++ A AN M + A P T+ +V + G I L L
Sbjct: 63 WKVADAGETLAQQAFGAGANW---MTIICAAPLATVEKGHAVAQRCGGEIQIELFGNWTL 119
Query: 124 TSMDDF--------------DLRESGYEKDISDMVRMRAVQARDIGM-----GGIVCSPQ 164
D+ D + SG + +D+ RM+A+ DIG+ GGI +P
Sbjct: 120 DDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALS--DIGLELSITGGI--TPA 175
Query: 165 EVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPV 224
++ + ++I A + R + AA+P
Sbjct: 176 DLPLFKDI---------------------------RVKAF-------IAGRALAGAANPA 201
Query: 225 SAAQEFQRAISLI 237
A +F I I
Sbjct: 202 QVAADFHAQIDAI 214
>gnl|CDD|181086 PRK07695, PRK07695, transcriptional regulator TenI; Provisional.
Length = 201
Score = 28.4 bits (64), Expect = 1.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234
TPE L G S I V I +A+P S A+ + +I
Sbjct: 159 TPENTRDVLAAGVSGIAVMSGIFSSANPYSKAKRYAESI 197
>gnl|CDD|180799 PRK07028, PRK07028, bifunctional hexulose-6-phosphate
synthase/ribonuclease regulator; Validated.
Length = 430
Score = 28.4 bits (64), Expect = 1.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 203 ALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234
A+ GA ++V I+++AD AA++ + AI
Sbjct: 179 AVAAGADIVIVGGNIIKSADVTEAARKIREAI 210
>gnl|CDD|163331 TIGR03569, NeuB_NnaB, N-acetylneuraminate synthase. This family is
a subset of the Pfam model pfam03102 and is believed to
include only authentic NeuB N-acetylneuraminate (sialic
acid) synthase enzymes. The majority of the genes
identified by this model are observed adjacent to both
the NeuA and NeuC genes which together effect the
biosynthesis of CMP-N-acetylneuraminate from
UDP-N-acetylglucosamine.
Length = 329
Score = 28.3 bits (64), Expect = 1.8
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 68 LDMKLFDIGSS-VTAA--IEHIANMGVAML--TVHAYPQTMRSAVSVVRDTGICLLAVTV 122
L + F I S +T A ++ IA G ++ T A + + +AV V+RD G +T+
Sbjct: 108 LGVPRFKIPSGEITNAPLLKKIARFGKPVILSTGMATLEEIEAAVGVLRDAGTPDSNITL 167
Query: 123 L-------TSMDDFDLR 132
L +D +L
Sbjct: 168 LHCTTEYPAPFEDVNLN 184
>gnl|CDD|162000 TIGR00693, thiE, thiamine-phosphate pyrophosphorylase. This model
includes ThiE from Bacillus subtilis but excludes its
paralog, the regulatory protein TenI, and neighbors of
TenI.
Length = 196
Score = 28.0 bits (63), Expect = 2.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEF 230
T E A L GA + V I++AADP +AA++
Sbjct: 162 TLENAAEVLAAGADGVAVVSAIMQAADPKAAAKQL 196
>gnl|CDD|130370 TIGR01303, IMP_DH_rel_1, IMP dehydrogenase family protein. This
model represents a family of proteins, often annotated
as a putative IMP dehydrogenase, related to IMP
dehydrogenase and GMP reductase and restricted to the
high GC Gram-positive bacteria. All species in which a
member is found so far (Corynebacterium glutamicum,
Mycobacterium tuberculosis, Streptomyces coelicolor,
etc.) also have IMP dehydrogenase as described by
TIGRFAMs entry TIGR01302.
Length = 475
Score = 27.2 bits (60), Expect = 3.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 75 IGSSVTAAIEHIANMGVAML---TVHAYPQTMRSAVSVVR--DTGICLLAVTVLTSMDDF 129
I V + + + GV +L T H + M SA+ VR D G+ ++A V+++
Sbjct: 222 INGDVGGKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVR 281
Query: 130 DLRESG 135
DL E+G
Sbjct: 282 DLLEAG 287
>gnl|CDD|178839 PRK00071, nadD, nicotinic acid mononucleotide adenylyltransferase;
Provisional.
Length = 203
Score = 26.7 bits (60), Expect = 5.7
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 11/71 (15%)
Query: 15 LVVGLD----LPTVKEAERIVSILSDTVSFYKI---GYHLSFSGGLELARDLISDGKSVF 67
++G D LP K E I+ V F + GY L L + L + G
Sbjct: 105 FIIGADALAQLPRWKRWEEILD----LVHFVVVPRPGYPLEALALPALQQLLEAAGAITL 160
Query: 68 LDMKLFDIGSS 78
LD+ L I S+
Sbjct: 161 LDVPLLAISST 171
>gnl|CDD|132374 TIGR03331, SAM_DCase_Eco, S-adenosylmethionine decarboxylase
proenzyme, Escherichia coli form. Members of this
protein family are the single chain precursor of the
S-adenosylmethionine decarboxylase as found in
Escherichia coli. This form shows a substantially
different architecture from the form shared by the
Archaea, Bacillus, and many other species (TIGR03330).
It shows little or no similarity to the form found in
eukaryotes (TIGR00535).
Length = 259
Score = 26.6 bits (59), Expect = 6.2
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 20/87 (22%)
Query: 27 AERIVSILSDTVSFYKIGYHLSFSGGLELAR-DLISDGKSVF-------LDMKLFDIGSS 78
AER+ IL+D IG ++ L +AR D G SV ++ + D S
Sbjct: 43 AERLTQILTDVAEI--IGANI-----LNIARQDYEPQGASVTILISEEPVEPEKIDNSES 95
Query: 79 ---VTAAIEHIANMGVAMLTVHAYPQT 102
+ A+ +A++ + +TVH YP++
Sbjct: 96 PGPLPDAV--VAHLDKSHITVHTYPES 120
>gnl|CDD|181322 PRK08249, PRK08249, cystathionine gamma-synthase; Provisional.
Length = 398
Score = 26.2 bits (58), Expect = 7.4
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 156 MGGIVCSPQE----VRMVREIVGHNM 177
+GG+VC +E V REI G M
Sbjct: 219 LGGVVCGSKELMEQVYHYREINGATM 244
>gnl|CDD|183963 PRK13306, ulaD, 3-keto-L-gulonate-6-phosphate decarboxylase;
Provisional.
Length = 216
Score = 26.0 bits (58), Expect = 7.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 215 RPIVRAADPVSAAQEFQRAI 234
R I AADP +AA+ F+ I
Sbjct: 192 RAIRGAADPAAAARAFKDEI 211
>gnl|CDD|152573 pfam12138, Spherulin4, Spherulation-specific family 4. This
protein is found in bacteria, archaea and eukaryotes.
Proteins in this family are typically between 250 and
398 amino acids in length. There is a conserved NPG
sequence motif and there are two completely conserved G
residues that may be functionally important. Starvation
will often induce spherulation - the production of
spores - and this process may involve DNA-methylation.
Changes in the methylation of spherulin4 are associated
with the formation of spherules, but these changes are
probably transient. Methylation of the gene accompanies
its transcriptional activation, and spherulin4 mRNA is
only detectable in late spherulating cultures and mature
spherules. It is a spherulation-specific protein.
Length = 243
Score = 26.1 bits (58), Expect = 8.3
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 14/64 (21%)
Query: 137 EKDISDMVRMRAVQARDIGMGGIV-------CSPQEVRMVREIVGH-------NMVIVTP 182
DI + A G+ GI + + R I + +V++ P
Sbjct: 85 LADIDTYAGWPSQSATGYGVDGIFLDETPSDYNASYLEYYRNITSYIKGLGGDGLVVLNP 144
Query: 183 GIRM 186
G ++
Sbjct: 145 GTQV 148
>gnl|CDD|100814 PRK01207, PRK01207, methionine synthase; Provisional.
Length = 343
Score = 26.0 bits (57), Expect = 9.5
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 33 ILSDTVSFYKI-GYHLSFSGGLELARDLISDGKSVFLDMKLFDIGSSVTAAIEHIANMGV 91
+L D + I GY+L +S L + + F D+K F + +++ +G+
Sbjct: 220 LLYDRIPELNIDGYNLEYSNRDTLEPGTSDEKRPGFQDLKYF---AEHNESLQRKKFIGL 276
Query: 92 AMLTVH 97
+ VH
Sbjct: 277 GVTDVH 282
>gnl|CDD|179762 PRK04169, PRK04169, geranylgeranylglyceryl phosphate synthase-like
protein; Reviewed.
Length = 232
Score = 25.9 bits (58), Expect = 9.6
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 16/62 (25%)
Query: 155 GMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETA---LKYGASHI 211
G G P+ V+ V++ + +I GIR +PE A + GA I
Sbjct: 164 GGAGDPVPPEMVKAVKKALDITPLIYGGGIR-------------SPEQARELMAAGADTI 210
Query: 212 VV 213
VV
Sbjct: 211 VV 212
Database: CddB
Posted date: Feb 4, 2011 9:54 PM
Number of letters in database: 5,994,473
Number of sequences in database: 21,608
Lambda K H
0.322 0.136 0.376
Gapped
Lambda K H
0.267 0.0677 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 3,907,045
Number of extensions: 251586
Number of successful extensions: 560
Number of sequences better than 10.0: 1
Number of HSP's gapped: 551
Number of HSP's successfully gapped: 35
Length of query: 238
Length of database: 5,994,473
Length adjustment: 91
Effective length of query: 147
Effective length of database: 4,028,145
Effective search space: 592137315
Effective search space used: 592137315
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.5 bits)