RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780453|ref|YP_003064866.1| orotidine 5'-phosphate decarboxylase [Candidatus Liberibacter asiaticus str. psy62] (238 letters) >gnl|CDD|178939 PRK00230, PRK00230, orotidine 5'-phosphate decarboxylase; Reviewed. Length = 230 Score = 271 bits (696), Expect = 1e-73 Identities = 93/225 (41%), Positives = 131/225 (58%), Gaps = 3/225 (1%) Query: 13 KRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKL 72 RL+V LD P+ +EA + L V F K+G L +GG + R+L G VFLD+KL Sbjct: 3 DRLIVALDFPSKEEALAFLDQLDPAVLFVKVGMELFTAGGPQFVRELKQRGFKVFLDLKL 62 Query: 73 FDIGSSVTAAIEHIANMGVAMLTVHAY--PQTMRSAVSVVRD-TGICLLAVTVLTSMDDF 129 DI ++V A+ +A +GV M+ VHA P+ M++A + + L+AVTVLTSMD+ Sbjct: 63 HDIPNTVAKAVRALAKLGVDMVNVHASGGPRMMKAAREALEPKSRPLLIAVTVLTSMDEE 122 Query: 130 DLRESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGS 189 DL E G + + V A A++ G+ G+VCS QE +RE G + ++VTPGIR GS Sbjct: 123 DLAELGINLSLEEQVLRLAKLAQEAGLDGVVCSAQEAAAIREATGPDFLLVTPGIRPAGS 182 Query: 190 ATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 QKR TP A+ G+ +IVV RPI +AADP +A + I Sbjct: 183 DAGDQKRVMTPAQAIAAGSDYIVVGRPITQAADPAAAYEAILAEI 227 >gnl|CDD|162513 TIGR01740, pyrF, orotidine 5'-phosphate decarboxylase, subfamily 1. This model represents orotidine 5'-monophosphate decarboxylase, the PyrF protein of pyrimidine nucleotide biosynthesis. In many eukaryotes, the region hit by this model is part of a multifunctional protein. Length = 213 Score = 184 bits (468), Expect = 2e-47 Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 8/219 (3%) Query: 15 LVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKLFD 74 L+V LD+ T EA + L + K+G L GG ++ +L K +FLD+K D Sbjct: 1 LIVALDVTTKDEALDLADSLGPEIEVIKVGIDLLLDGGDKIIDELAKLNKLIFLDLKFAD 60 Query: 75 IGSSVTAAIEHIANMGVAMLTVHAYP--QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLR 132 I ++V E G M+ VH +++ +A + G LLAVT LTSM D Sbjct: 61 IPNTVKLQYESKIKQGADMVNVHGVAGSESVEAAKEAASEGGRGLLAVTELTSMGSLDYG 120 Query: 133 ESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGSATD 192 E EK ++ A +A+ G+ G VCS +E + +R+ G + +I+TPGIR+ D Sbjct: 121 EDTMEK----VLEY-AKEAKAFGLDGPVCSAEEAKEIRKFTG-DFLILTPGIRLQSKGAD 174 Query: 193 GQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQ 231 Q+R T E A + GA I+V R I A DPV AA+ + Sbjct: 175 DQQRVVTLEDAKEAGADVIIVGRGIYAAEDPVEAAKRIR 213 >gnl|CDD|184343 PRK13813, PRK13813, orotidine 5'-phosphate decarboxylase; Provisional. Length = 215 Score = 114 bits (288), Expect = 2e-26 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 23/231 (9%) Query: 12 KKRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMK 71 R+++ LD+ + A +I L D V K+G+ L + GL + +L V D+K Sbjct: 3 DSRIILALDVTDRERALKIAEELDDYVDAIKVGWPLVLASGLGIIEELKRYAP-VIADLK 61 Query: 72 LFDIGSSVTAAIEHIANMGVAMLTVHAYP--QTMRSAVSVVRDTGICLLAVTVLTSMDDF 129 + DI ++ E + G + VH + ++++ V ++G + V ++ Sbjct: 62 VADIPNTNRLICEAVFEAGAWGIIVHGFTGRDSLKAVVEAAAESGGKVFVVVEMS----- 116 Query: 130 DLRESGYEKDISDMVRMRAVQARDIGMGGIVCS---PQEVRMVREIVGHNMVIVTPGIRM 186 G + I A A++ G G+V P+ VR +R +G + I++PGI Sbjct: 117 ---HPGALEFIQPHADKLAKLAQEAGAFGVVAPATRPERVRYIRSRLGDELKIISPGIGA 173 Query: 187 LGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAISLI 237 G A+K GA +++V R I AADP AA+ I Sbjct: 174 QG---------GKAADAIKAGADYVIVGRSIYNAADPREAAKAINEEIRGA 215 >gnl|CDD|162717 TIGR02127, pyrF_sub2, orotidine 5'-phosphate decarboxylase, subfamily 2. This model represents orotidine 5'-monophosphate decarboxylase, the PyrF protein of pyrimidine nucleotide biosynthesis. See TIGR01740 for a related but distinct subfamily of the same enzyme. Length = 261 Score = 36.6 bits (85), Expect = 0.006 Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 47/254 (18%) Query: 12 KKRLVVGLD----------LPTVKEA-----ERIVSILSDTVSFYKIGYHLSF-----SG 51 + L VGLD LP+ RI+ ++ + K ++F S Sbjct: 13 RSPLCVGLDPRLELLPEWGLPSSAAGLQAFCLRIIDATAEYAAVVKP--QVAFFERFGSE 70 Query: 52 GLELARDLISDGKS----VFLDMKLFDIGSSVTA-AIEHIANMGVAMLTVHAY--PQTMR 104 G + ++I+ +S V D+K DIGS+ +A A + ++ LTV Y ++R Sbjct: 71 GFKALEEVIAHARSLGLPVLADVKRGDIGSTASAYAKAWLGHLHADALTVSPYLGLDSLR 130 Query: 105 SAVSVVRDTGICLLAVTVLTS-MDDFDLRESGYEK------DISDMVRMRAVQARDIGMG 157 + R G + V V TS DL++ +++++ D Sbjct: 131 PFLEYARANG-AGIFVLVKTSNPGGADLQDLRVSDGRTVYEEVAELAGELNESPGDCSSV 189 Query: 158 GIV---CSPQEVRMVREIVGHNMVIVTPGIRMLG-SATDGQKRFATPETALKYGASHIVV 213 G V SP ++ +R + + PG G A D + F A G I Sbjct: 190 GAVVGATSPGDLLRLRIEMPT-APFLVPGFGAQGAEAADLRGLFG----ADGSGLL-INS 243 Query: 214 SRPIVRAADPVSAA 227 SR ++ A SA Sbjct: 244 SRGVLFAGPRSSAL 257 >gnl|CDD|178817 PRK00043, thiE, thiamine-phosphate pyrophosphorylase; Reviewed. Length = 212 Score = 33.6 bits (78), Expect = 0.045 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 TPE A L+ GA + V I A DP +AA+ A Sbjct: 170 TPENAPEVLEAGADGVAVVSAITGAEDPEAAARALLAAF 208 >gnl|CDD|183964 PRK13307, PRK13307, bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional. Length = 391 Score = 33.4 bits (77), Expect = 0.045 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 46/231 (19%) Query: 15 LVVGLDLPTVKEAERIVSIL--SDTVSFYKIGYHLSFSGGLELAR----DLISDGKSVF- 67 L V LDLP ++E ER++S L SD H+ G L + ++IS + V Sbjct: 175 LQVALDLPDLEEVERVLSQLPKSD---------HIIIEAGTPLIKKFGLEVISKIREVRP 225 Query: 68 -----LDMKLFDIGS-SVTAAIEHIANMGVAMLTVHAYPQTMRSAVSVVRDTGICLLAVT 121 D+K D G+ A + A+ V + + A T+ A+ + TGI ++ Sbjct: 226 DAFIVADLKTLDTGNLEARMAADATAD-AVVISGL-APISTIEKAIHEAQKTGI--YSIL 281 Query: 122 VLTSMDDFD--LRESGYEKDISDMVRMRAVQARDIGMGGIVCSPQEVRMVREIVGHNMVI 179 + +++D L + D+ ++ R + + G I + +++ G +V Sbjct: 282 DMLNVEDPVKLLESLKVKPDVVELHRGIDEEGTEHAWGNI-------KEIKKAGGKILVA 334 Query: 180 VTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEF 230 V G+R+ E ALK GA +VV R I ++ D AA++F Sbjct: 335 VAGGVRV-----------ENVEEALKAGADILVVGRAITKSKDVRRAAEDF 374 >gnl|CDD|132172 TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase. Length = 206 Score = 32.0 bits (73), Expect = 0.13 Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 27/226 (11%) Query: 15 LVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDL--ISDGKSVFLDMKL 72 L + LDL ++EA + ++D V +IG L + G+E +++ + V D+K Sbjct: 2 LQLALDLLDIEEALELAEKVADYVDIIEIGTPLIKNEGIEAVKEMKEAFPDRKVLADLKT 61 Query: 73 FDIGS-SVTAAIEHIANMGVAMLTVHAYPQTMRSAVSVVRDTGICLLAVTVLTSMDDFDL 131 D G A A++ V +L V A T++ AV + G + L ++ D Sbjct: 62 MDAGEYEAEQAFAAGADI-VTVLGV-ADDATIKGAVKAAKKHGKEVQV--DLINVKDKVK 117 Query: 132 RESGYEKDISDMVRMRA---VQARDIGMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLG 188 R ++ +D + + QA+ G +++V+E V V GI + Sbjct: 118 RAKELKELGADYIGVHTGLDEQAK--GQNPFEDLQTILKLVKEAR----VAVAGGINL-- 169 Query: 189 SATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 T +K G ++V I +AADP AA++ ++ I Sbjct: 170 ---------DTIPDVIKLGPDIVIVGGAITKAADPAEAARQIRKLI 206 >gnl|CDD|178236 PLN02629, PLN02629, powdery mildew resistance 5. Length = 387 Score = 31.0 bits (70), Expect = 0.24 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 98 AYPQTMRSAVSVVRD--TGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARD 153 AYP MR V+R LL +T+L+ + D S Y D+S R ++ D Sbjct: 308 AYPDQMRVVDEVIRGMHNPAYLLDITLLSELRK-DGHPSIYSGDLSPSQRANPDRSAD 364 >gnl|CDD|183962 PRK13305, sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase; Provisional. Length = 218 Score = 29.0 bits (65), Expect = 1.1 Identities = 56/253 (22%), Positives = 93/253 (36%), Gaps = 68/253 (26%) Query: 12 KKRLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISD--GKSVFLD 69 + L + LD +++ A+R V++L D V + G L + GL + L K + D Sbjct: 3 RPLLQLALDHTSLEAAQRDVTLLKDHVDIVEAGTILCLNEGLGAVKALREQCPDKIIVAD 62 Query: 70 MKLFDIGSSVT-AAIEHIANMGVAMLTVHAYP-QTMRSAVSVVRDTG----ICLLAVTVL 123 K+ D G ++ A AN M + A P T+ +V + G I L L Sbjct: 63 WKVADAGETLAQQAFGAGANW---MTIICAAPLATVEKGHAVAQRCGGEIQIELFGNWTL 119 Query: 124 TSMDDF--------------DLRESGYEKDISDMVRMRAVQARDIGM-----GGIVCSPQ 164 D+ D + SG + +D+ RM+A+ DIG+ GGI +P Sbjct: 120 DDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALS--DIGLELSITGGI--TPA 175 Query: 165 EVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPV 224 ++ + ++I A + R + AA+P Sbjct: 176 DLPLFKDI---------------------------RVKAF-------IAGRALAGAANPA 201 Query: 225 SAAQEFQRAISLI 237 A +F I I Sbjct: 202 QVAADFHAQIDAI 214 >gnl|CDD|181086 PRK07695, PRK07695, transcriptional regulator TenI; Provisional. Length = 201 Score = 28.4 bits (64), Expect = 1.5 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 TPE L G S I V I +A+P S A+ + +I Sbjct: 159 TPENTRDVLAAGVSGIAVMSGIFSSANPYSKAKRYAESI 197 >gnl|CDD|180799 PRK07028, PRK07028, bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated. Length = 430 Score = 28.4 bits (64), Expect = 1.7 Identities = 11/32 (34%), Positives = 20/32 (62%) Query: 203 ALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 A+ GA ++V I+++AD AA++ + AI Sbjct: 179 AVAAGADIVIVGGNIIKSADVTEAARKIREAI 210 >gnl|CDD|163331 TIGR03569, NeuB_NnaB, N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine. Length = 329 Score = 28.3 bits (64), Expect = 1.8 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Query: 68 LDMKLFDIGSS-VTAA--IEHIANMGVAML--TVHAYPQTMRSAVSVVRDTGICLLAVTV 122 L + F I S +T A ++ IA G ++ T A + + +AV V+RD G +T+ Sbjct: 108 LGVPRFKIPSGEITNAPLLKKIARFGKPVILSTGMATLEEIEAAVGVLRDAGTPDSNITL 167 Query: 123 L-------TSMDDFDLR 132 L +D +L Sbjct: 168 LHCTTEYPAPFEDVNLN 184 >gnl|CDD|162000 TIGR00693, thiE, thiamine-phosphate pyrophosphorylase. This model includes ThiE from Bacillus subtilis but excludes its paralog, the regulatory protein TenI, and neighbors of TenI. Length = 196 Score = 28.0 bits (63), Expect = 2.2 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Query: 199 TPETA---LKYGASHIVVSRPIVRAADPVSAAQEF 230 T E A L GA + V I++AADP +AA++ Sbjct: 162 TLENAAEVLAAGADGVAVVSAIMQAADPKAAAKQL 196 >gnl|CDD|130370 TIGR01303, IMP_DH_rel_1, IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302. Length = 475 Score = 27.2 bits (60), Expect = 3.8 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 75 IGSSVTAAIEHIANMGVAML---TVHAYPQTMRSAVSVVR--DTGICLLAVTVLTSMDDF 129 I V + + + GV +L T H + M SA+ VR D G+ ++A V+++ Sbjct: 222 INGDVGGKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVR 281 Query: 130 DLRESG 135 DL E+G Sbjct: 282 DLLEAG 287 >gnl|CDD|178839 PRK00071, nadD, nicotinic acid mononucleotide adenylyltransferase; Provisional. Length = 203 Score = 26.7 bits (60), Expect = 5.7 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 11/71 (15%) Query: 15 LVVGLD----LPTVKEAERIVSILSDTVSFYKI---GYHLSFSGGLELARDLISDGKSVF 67 ++G D LP K E I+ V F + GY L L + L + G Sbjct: 105 FIIGADALAQLPRWKRWEEILD----LVHFVVVPRPGYPLEALALPALQQLLEAAGAITL 160 Query: 68 LDMKLFDIGSS 78 LD+ L I S+ Sbjct: 161 LDVPLLAISST 171 >gnl|CDD|132374 TIGR03331, SAM_DCase_Eco, S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form. Members of this protein family are the single chain precursor of the S-adenosylmethionine decarboxylase as found in Escherichia coli. This form shows a substantially different architecture from the form shared by the Archaea, Bacillus, and many other species (TIGR03330). It shows little or no similarity to the form found in eukaryotes (TIGR00535). Length = 259 Score = 26.6 bits (59), Expect = 6.2 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 20/87 (22%) Query: 27 AERIVSILSDTVSFYKIGYHLSFSGGLELAR-DLISDGKSVF-------LDMKLFDIGSS 78 AER+ IL+D IG ++ L +AR D G SV ++ + D S Sbjct: 43 AERLTQILTDVAEI--IGANI-----LNIARQDYEPQGASVTILISEEPVEPEKIDNSES 95 Query: 79 ---VTAAIEHIANMGVAMLTVHAYPQT 102 + A+ +A++ + +TVH YP++ Sbjct: 96 PGPLPDAV--VAHLDKSHITVHTYPES 120 >gnl|CDD|181322 PRK08249, PRK08249, cystathionine gamma-synthase; Provisional. Length = 398 Score = 26.2 bits (58), Expect = 7.4 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%) Query: 156 MGGIVCSPQE----VRMVREIVGHNM 177 +GG+VC +E V REI G M Sbjct: 219 LGGVVCGSKELMEQVYHYREINGATM 244 >gnl|CDD|183963 PRK13306, ulaD, 3-keto-L-gulonate-6-phosphate decarboxylase; Provisional. Length = 216 Score = 26.0 bits (58), Expect = 7.7 Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 215 RPIVRAADPVSAAQEFQRAI 234 R I AADP +AA+ F+ I Sbjct: 192 RAIRGAADPAAAARAFKDEI 211 >gnl|CDD|152573 pfam12138, Spherulin4, Spherulation-specific family 4. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein. Length = 243 Score = 26.1 bits (58), Expect = 8.3 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 14/64 (21%) Query: 137 EKDISDMVRMRAVQARDIGMGGIV-------CSPQEVRMVREIVGH-------NMVIVTP 182 DI + A G+ GI + + R I + +V++ P Sbjct: 85 LADIDTYAGWPSQSATGYGVDGIFLDETPSDYNASYLEYYRNITSYIKGLGGDGLVVLNP 144 Query: 183 GIRM 186 G ++ Sbjct: 145 GTQV 148 >gnl|CDD|100814 PRK01207, PRK01207, methionine synthase; Provisional. Length = 343 Score = 26.0 bits (57), Expect = 9.5 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 33 ILSDTVSFYKI-GYHLSFSGGLELARDLISDGKSVFLDMKLFDIGSSVTAAIEHIANMGV 91 +L D + I GY+L +S L + + F D+K F + +++ +G+ Sbjct: 220 LLYDRIPELNIDGYNLEYSNRDTLEPGTSDEKRPGFQDLKYF---AEHNESLQRKKFIGL 276 Query: 92 AMLTVH 97 + VH Sbjct: 277 GVTDVH 282 >gnl|CDD|179762 PRK04169, PRK04169, geranylgeranylglyceryl phosphate synthase-like protein; Reviewed. Length = 232 Score = 25.9 bits (58), Expect = 9.6 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 16/62 (25%) Query: 155 GMGGIVCSPQEVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETA---LKYGASHI 211 G G P+ V+ V++ + +I GIR +PE A + GA I Sbjct: 164 GGAGDPVPPEMVKAVKKALDITPLIYGGGIR-------------SPEQARELMAAGADTI 210 Query: 212 VV 213 VV Sbjct: 211 VV 212 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.322 0.136 0.376 Gapped Lambda K H 0.267 0.0677 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 3,907,045 Number of extensions: 251586 Number of successful extensions: 560 Number of sequences better than 10.0: 1 Number of HSP's gapped: 551 Number of HSP's successfully gapped: 35 Length of query: 238 Length of database: 5,994,473 Length adjustment: 91 Effective length of query: 147 Effective length of database: 4,028,145 Effective search space: 592137315 Effective search space used: 592137315 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 56 (25.5 bits)