HHsearch alignment for GI: 254780454 and conserved domain: PRK06673

>PRK06673 DNA polymerase III subunit beta; Validated.
Probab=100.00  E-value=0  Score=603.36  Aligned_cols=362  Identities=25%  Similarity=0.454  Sum_probs=330.8

Q ss_pred             CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEEEECC--------CCEEEEEHH
Q ss_conf             958985999999999875020378886101338999989979999967828999999777526--------807999499
Q gi|254780454|r    1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVDV--------CGSITVSAH   72 (385)
Q Consensus         1 Mk~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~~i~~--------~G~~~v~a~   72 (385)
T Consensus         1 Mkf~i~k~~L~~~l~~v~~~i~~k~~~piL~~ili~a~~~~l~l~atD~ei~i~~~i~~~v~~~~~~~i~~~G~~~v~ak   80 (376)
T PRK06673          1 MEFIVNHKHFTQALSEVSKAISTKAIIPILSGIKITADQSGITLIASNSNIFIEKFIPSAIDDEQITTILQAGTIVVPAK   80 (376)
T ss_pred             CEEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCEEEEEEECCCEEEEEEEEEEEEECCCEEECCCCEEEEEHH
T ss_conf             97999899999999998736177986478739899998996999997786399999876773022101025817999879


Q ss_pred             HHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCEEEECCCCC
Q ss_conf             87788740777773047773367508999867820243036621143212332430450561135542022023002455
Q gi|254780454|r   73 LLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEEEYVYSFELASSVLKNLVERTHFAMATEE  152 (385)
Q Consensus        73 ~l~~iik~L~~~~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~~~~~~~~~~~i~~~~l~~~i~~t~~a~s~d~  152 (385)
T Consensus        81 ~l~eivk~lp~~~-~~~-~~~--~~~l~i~~~~~~f~l~~~~~~dfP~~p~~~~~~~~~i~~~~l~~~i~kt~fA~s~de  156 (376)
T PRK06673         81 YFIEIIKKMPSDI-VIK-SKN--EQTITIQSGEITLNLNGFPANEFPNVPQIDDHTEIQIETKQLIDAFKQTVFAVAKNE  156 (376)
T ss_pred             HHHHHHHHCCCCC-EEE-ECC--CCEEEEEECCEEEECCCCCHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCC
T ss_conf             9999997489865-599-727--988999978789982687968854566667773599859999999997673553656


Q ss_pred             CCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
Q ss_conf             65210116677617873489998534157666643578753310000010001222210277646433133455301002
Q gi|254780454|r  153 IRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNI  232 (385)
Q Consensus       153 ~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l~el~k~l~~~~~~v~i~~~~~~i~~~~  232 (385)
T Consensus       157 ~rp~l~Gv~~~~~~~--~l~~vATDg~RLa~~~~~~~~~--~~~~~iiP~k~l~el~kll~~~~e~v~i~~~~~~i~f~~  232 (376)
T PRK06673        157 SRPVLTGVHIELDHN--KLICAATDSHRLAIRETLISTN--MKANCIVPSATINELLKLMNSNLEFVSIYLSESHIIFTF  232 (376)
T ss_pred             CCHHEEEEEEECCCC--EEEEEEECCCEEEEEECCCCCC--CCCCEEECHHHHHHHHHHHCCCCCEEEEEECCCEEEEEE
T ss_conf             714422387723599--8999997584568886035888--774378328999999977405885478972561599998


Q ss_pred             CEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCC-CCCCCEEEE-ECCEEEEEECCCCCEEEEEE
Q ss_conf             5069998512665532210135556617998489988889887410123-555302565-17659999807873268999
Q gi|254780454|r  233 ESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSV-RIQAVKLSL-SSDKLCMTVDNPDMGKAIES  310 (385)
Q Consensus       233 ~~~~~~srLi~g~yPdy~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~~-~~~~i~l~~-~~~~l~i~~~~~e~g~~~e~  310 (385)
T Consensus       233 ~~~~~~srLIeg~fPdy~~viP~~~~~~~~v~r~~ll~al~Rvsi~~~~~~~~~v~l~~~~~~~l~i~s~~~~~G~~~e~  312 (376)
T PRK06673        233 GTTTLYSRLIEGKYPNISTLIPNEFQTVINIDRQRMLQGVDRSSLLASEWANNNVNLEIVNESTIQISSNASQIGKISET  312 (376)
T ss_pred             CCEEEEEEECCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEE
T ss_conf             99899998126678877772899998699998999999999999771146688469998689859999669876661168


Q ss_pred             EEEE--ECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf             9989--6288439996388998898735753346633899965898758994377654445556676379983212
Q gi|254780454|r  311 MNVY--YNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMR  384 (385)
Q Consensus       311 i~~~--~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMPvr  384 (385)
T Consensus       313 ~~~~~~~g~~~~~I~FN~~yLld~L~~i~~-----e~V~l~~~~~~~p~~i~~~~~---------~~~~ylvMPvR  374 (376)
T PRK06673        313 QQIDAIQGEKQLNISFDGRFMLDALRAIKE-----ETVTLSFSGSMRPILIEAGTQ---------SAAIHLISPVR  374 (376)
T ss_pred             EEECCCCCCCCEEEEECHHHHHHHHHCCCC-----CEEEEEECCCCCCEEEECCCC---------CCEEEEEECCC
T ss_conf             885023699868999889999999855899-----979999888999789977998---------84389997031