HHsearch alignment for GI: 254780454 and conserved domain: PRK07761

>PRK07761 DNA polymerase III subunit beta; Validated.
Probab=100.00  E-value=0  Score=622.98  Aligned_cols=368  Identities=26%  Similarity=0.438  Sum_probs=335.1

Q ss_pred             CEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEEEECCCCEEEEEHHHHHHHHHC
Q ss_conf             95898599999999987502037888610133899998997999996782899999977752680799949987788740
Q gi|254780454|r    1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPASVDVCGSITVSAHLLYDIVRK   80 (385)
Q Consensus         1 Mk~~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~~i~~~G~~~v~a~~l~~iik~   80 (385)
T Consensus         1 Mkf~i~k~~L~~~L~~v~~~v~~k~~~piL~~vliea~~~~l~l~atd~ei~i~~~i~~~i~e~G~~~vpak~l~~ivk~   80 (376)
T PRK07761          1 MKFRVERDDLADAVAWVARSLPARPPVPVLAGVLLEADDEGLTLSGFDYEVSARVRVSAEVDEPGRVLVSGRLLADITRA   80 (376)
T ss_pred             CEEEEEHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCEEEEEEECCCEEEEEEEEEEECCCEEEEEEHHHHHHHHHH
T ss_conf             97999999999999999866178987288778899998999999997782799999976871571899977999999974


Q ss_pred             CCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCEEEECCCCCCCCCEEEE
Q ss_conf             77777304777336750899986782024303662114321233243045056113554202202300245565210116
Q gi|254780454|r   81 LQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGI  160 (385)
Q Consensus        81 L~~~~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~~~~~~~~~~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv  160 (385)
T Consensus        81 lp~~~-I~l~~e---~~~l~I~~g~~~f~l~~~~~~dfP~~~~~~~~-~~~i~~~~l~~~i~~t~fa~s~~e~r~~L~Gv  155 (376)
T PRK07761         81 LPNKP-VEFSVD---GSRVTLTCGSARFTLPTMPVEDYPTLPQLPEE-TGTVPAELFAEAVSQVAVAAGRDDTLPMLTGI  155 (376)
T ss_pred             CCCCC-EEEEEC---CCEEEEEECCEEEEEECCCHHHCCCCCCCCCC-CEEECHHHHHHHHHHEEEEECCCCCHHHHCCE
T ss_conf             77763-279971---99999998977999634686878666788763-15898999999984375873174784773738


Q ss_pred             EEEECCCCCEEEEEEECCEEEEEEEEECCCCC-CCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCC-----CCCEEEECCE
Q ss_conf             67761787348999853415766664357875-33100000100012222102776464331334-----5530100250
Q gi|254780454|r  161 FFHINEEDLKLCAVATDGHRLAVAEVDIVAQI-AKMPSIIVPRKAVGEILRILSSKDSSVKVSLS-----ESRIHLNIES  234 (385)
Q Consensus       161 ~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~-~~~~~~iiP~k~l~el~k~l~~~~~~v~i~~~-----~~~i~~~~~~  234 (385)
T Consensus       156 ~~~~~~~--~l~~vATDghRLa~~~~~~~~~~~~~~~~~iIP~k~l~el~k~l~~-~~~v~l~~~~~~~~~~~i~f~~~~  232 (376)
T PRK07761        156 RLEIEGE--TVVLAATDRFRLAVRELTWSPGSPDIDAAALVPAKTLAEAAKALTL-GSEVRLALGTGDSVEGLLGFEGDG  232 (376)
T ss_pred             EEEEECC--EEEEEEECCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHCCC-CCCEEEEEECCCCCCEEEEEEECC
T ss_conf             9998499--8999997532101366324666777654357108999999975388-984899996686641279999899


Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEE
Q ss_conf             69998512665532210135556617998489988889887410123555302565176599998078732689999989
Q gi|254780454|r  235 LSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVY  314 (385)
Q Consensus       235 ~~~~srLi~g~yPdy~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~  314 (385)
T Consensus       233 ~~~~srLieg~fPdy~~viP~~~~~~~~v~r~~l~~al~Rvsl~s~-~~~~v~l~~~~~~l~lss~~~e~g~a~E~i~~~  311 (376)
T PRK07761        233 RRTTTRLLDGEFPKVRQLFPTEHTAVATVEVAELIEAIKRVALVAE-RNAPVRMEFSDGTVTLSAGGDDVAQAEEDLDAA  311 (376)
T ss_pred             EEEEEEECCCCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHC-CCCCEEEEECCCCEEEEECCCCCCEEEEEEEEE
T ss_conf             9999980377898525117899980899840888889877521214-897279998599159996698764278999879


Q ss_pred             ECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEC
Q ss_conf             62884399963889988987357533466338999658987589943776544455566763799832129
Q gi|254780454|r  315 YNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI  385 (385)
Q Consensus       315 ~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMPvri  385 (385)
T Consensus       312 ~~Ge~~~I~FN~~yL~d~L~~i~~-----e~V~l~~~~~~~p~~i~p~~~~~---~~~~~~~~yviMP~rl  374 (376)
T PRK07761        312 LTGEPLTIAFNPTYLLDGLSALHS-----ERVRFGFTTPSKPALLTPAPEDD---PAPDTDYRYLLMPVRL  374 (376)
T ss_pred             EECCCEEEEECHHHHHHHHHCCCC-----CEEEEEECCCCCCEEEECCCCCC---CCCCCCEEEEEECEEC
T ss_conf             708867999989999999850899-----87999987899988998077655---5666660699954143