HHsearch alignment for GI: 254780454 and conserved domain: PTZ00113

>PTZ00113 proliferating cell nuclear antigen (cyclin); Provisional.
Probab=98.40  E-value=6.3e-05  Score=48.88  Aligned_cols=212  Identities=11%  Similarity=0.124  Sum_probs=125.5

Q ss_pred             CEEEEE-HHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEE--EEEEE------EEECCCCEEEEEH
Q ss_conf             958985-99999999987502037888610133899998997999996782899--99997------7752680799949
Q gi|254780454|r    1 MKITVE-RSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEI--TGAIP------ASVDVCGSITVSA   71 (385)
Q Consensus         1 Mk~~i~-~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i--~~~i~------~~i~~~G~~~v~a   71 (385)
T Consensus         2 ~e~k~~~a~~~k~i~e~lk~lv---------~e~~~~~~~~Gi~iqamD~shVaLv~l~L~~~~F~~Y~~~~~~~iGvn~   72 (277)
T PTZ00113          2 LELKLNNAVVLRRIFDCIRDLI---------NDGNIDFDATGMKLQALDGNHVALVHLKLHESGFSLYRCDRPRALGINI   72 (277)
T ss_pred             EEEEECCHHHHHHHHHHHHHHH---------CEEEEEECCCEEEEEEECCCCEEEEEEEECHHHCEEEECCCCEEEEEEH
T ss_conf             2899755689999999999864---------5178999588579999867848999999896438199559986998988


Q ss_pred             HHHHHHHHCCCCCCCEEEEEECCCCEEEEE--EECC----CEEEEECCCCC-CCCCCCCCC--CCEEEECCCHHHHHHHC
Q ss_conf             987788740777773047773367508999--8678----20243036621-143212332--43045056113554202
Q gi|254780454|r   72 HLLYDIVRKLQDGAQISFFKENELGTEVNI--SHGD----SNFYLQSFPES-EFPSTKEEE--YVYSFELASSVLKNLVE  142 (385)
Q Consensus        72 ~~l~~iik~L~~~~~i~~~~~~~~~~~i~i--~~~~----~~~~l~~~~~~-~fP~~~~~~--~~~~~~i~~~~l~~~i~  142 (385)
T Consensus        73 ~~l~kiLk~~~~~d~l~l~~~~~~-~~l~i~~~~~~~~~~~~f~l~L~did~e~l~IPe~e~~~~~~i~m~S~~f~~~ik  151 (277)
T PTZ00113         73 NSVTKAFKSCGNNDSVLIQSEEDK-DNINFVFENNVEDRVTSFSLKLMSIEQDALSIPENTEGFDAEITLSSKELTNICK  151 (277)
T ss_pred             HHHHHHHHHCCCCCEEEEEEECCC-CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
T ss_conf             999999862569976999980799-8799999758863588999986136754567999876542899981999999999


Q ss_pred             CEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCC-----------CCCCCHHCCCCCHHHHHHHH
Q ss_conf             2023002455652101166776178734899985341576666435787-----------53310000010001222210
Q gi|254780454|r  143 RTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQ-----------IAKMPSIIVPRKAVGEILRI  211 (385)
Q Consensus       143 ~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~-----------~~~~~~~iiP~k~l~el~k~  211 (385)
T Consensus       152 dl~~~-~-d~-------I~i~~~~~~~~~~~~Gd~g~~--~~~~~~~~~~~e~~~~~~i~~~~~~~~~ysl~YL~~f~K~  220 (277)
T PTZ00113        152 QMNEF-S-DT-------VKIDISSNSIKFTTKGDLGDG--EIVLKNRAPTSEDDCGVTIKVKKPIKQSYATKYLLMFSKS  220 (277)
T ss_pred             HHHHC-C-CE-------EEEEEECCEEEEEEEECCCEE--EEEEECCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCC
T ss_conf             99862-9-88-------999995998999998037528--9999527887886530689738836889848998865370


Q ss_pred             CCCCCCCCCCCCCCCC---EEEECCE
Q ss_conf             2776464331334553---0100250
Q gi|254780454|r  212 LSSKDSSVKVSLSESR---IHLNIES  234 (385)
Q Consensus       212 l~~~~~~v~i~~~~~~---i~~~~~~  234 (385)
T Consensus       221 ~~l-s~~V~i~~~~d~Pl~l~y~l~~  245 (277)
T PTZ00113        221 GCL-SDVVTLGLSQNRPIEVKYEVKD  245 (277)
T ss_pred             CCC-CCEEEEEEECCCCEEEEEEECC
T ss_conf             567-8769999709967899999479