HHsearch alignment for GI: 254780454 and conserved domain: PTZ00113
>PTZ00113 proliferating cell nuclear antigen (cyclin); Provisional.
Probab=98.40 E-value=6.3e-05 Score=48.88 Aligned_cols=212 Identities=11% Similarity=0.124 Sum_probs=125.5
Q ss_pred CEEEEE-HHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEE--EEEEE------EEECCCCEEEEEH
Q ss_conf 958985-99999999987502037888610133899998997999996782899--99997------7752680799949
Q gi|254780454|r 1 MKITVE-RSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEI--TGAIP------ASVDVCGSITVSA 71 (385)
Q Consensus 1 Mk~~i~-~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i--~~~i~------~~i~~~G~~~v~a 71 (385)
T Consensus 2 ~e~k~~~a~~~k~i~e~lk~lv---------~e~~~~~~~~Gi~iqamD~shVaLv~l~L~~~~F~~Y~~~~~~~iGvn~ 72 (277)
T PTZ00113 2 LELKLNNAVVLRRIFDCIRDLI---------NDGNIDFDATGMKLQALDGNHVALVHLKLHESGFSLYRCDRPRALGINI 72 (277)
T ss_pred EEEEECCHHHHHHHHHHHHHHH---------CEEEEEECCCEEEEEEECCCCEEEEEEEECHHHCEEEECCCCEEEEEEH
T ss_conf 2899755689999999999864---------5178999588579999867848999999896438199559986998988
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCEEEEE--EECC----CEEEEECCCCC-CCCCCCCCC--CCEEEECCCHHHHHHHC
Q ss_conf 987788740777773047773367508999--8678----20243036621-143212332--43045056113554202
Q gi|254780454|r 72 HLLYDIVRKLQDGAQISFFKENELGTEVNI--SHGD----SNFYLQSFPES-EFPSTKEEE--YVYSFELASSVLKNLVE 142 (385)
Q Consensus 72 ~~l~~iik~L~~~~~i~~~~~~~~~~~i~i--~~~~----~~~~l~~~~~~-~fP~~~~~~--~~~~~~i~~~~l~~~i~ 142 (385)
T Consensus 73 ~~l~kiLk~~~~~d~l~l~~~~~~-~~l~i~~~~~~~~~~~~f~l~L~did~e~l~IPe~e~~~~~~i~m~S~~f~~~ik 151 (277)
T PTZ00113 73 NSVTKAFKSCGNNDSVLIQSEEDK-DNINFVFENNVEDRVTSFSLKLMSIEQDALSIPENTEGFDAEITLSSKELTNICK 151 (277)
T ss_pred HHHHHHHHHCCCCCEEEEEEECCC-CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH
T ss_conf 999999862569976999980799-8799999758863588999986136754567999876542899981999999999
Q ss_pred CEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCC-----------CCCCCHHCCCCCHHHHHHHH
Q ss_conf 2023002455652101166776178734899985341576666435787-----------53310000010001222210
Q gi|254780454|r 143 RTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQ-----------IAKMPSIIVPRKAVGEILRI 211 (385)
Q Consensus 143 ~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~-----------~~~~~~~iiP~k~l~el~k~ 211 (385)
T Consensus 152 dl~~~-~-d~-------I~i~~~~~~~~~~~~Gd~g~~--~~~~~~~~~~~e~~~~~~i~~~~~~~~~ysl~YL~~f~K~ 220 (277)
T PTZ00113 152 QMNEF-S-DT-------VKIDISSNSIKFTTKGDLGDG--EIVLKNRAPTSEDDCGVTIKVKKPIKQSYATKYLLMFSKS 220 (277)
T ss_pred HHHHC-C-CE-------EEEEEECCEEEEEEEECCCEE--EEEEECCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHCC
T ss_conf 99862-9-88-------999995998999998037528--9999527887886530689738836889848998865370
Q ss_pred CCCCCCCCCCCCCCCC---EEEECCE
Q ss_conf 2776464331334553---0100250
Q gi|254780454|r 212 LSSKDSSVKVSLSESR---IHLNIES 234 (385)
Q Consensus 212 l~~~~~~v~i~~~~~~---i~~~~~~ 234 (385)
T Consensus 221 ~~l-s~~V~i~~~~d~Pl~l~y~l~~ 245 (277)
T PTZ00113 221 GCL-SDVVTLGLSQNRPIEVKYEVKD 245 (277)
T ss_pred CCC-CCEEEEEEECCCCEEEEEEECC
T ss_conf 567-8769999709967899999479