HHsearch alignment for GI: 254780454 and conserved domain: pfam02767
>pfam02767 DNA_pol3_beta_2 DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.
Probab=99.97 E-value=2e-31 Score=209.73 Aligned_cols=116 Identities=40% Similarity=0.682 Sum_probs=108.9
Q ss_pred ECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHHHHHHH
Q ss_conf 05611355420220230024556521011667761787348999853415766664357875331000001000122221
Q gi|254780454|r 131 ELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILR 210 (385)
Q Consensus 131 ~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l~el~k 210 (385)
T Consensus 1 Ti~~~~l~~~i~~t~fA~s~d~~r~~L~Gv~~~~~~~--~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iIP~k~l~el~k 78 (116)
T pfam02767 1 TLPQKVLKELIEQTAFAMGRDETRYVLNGVNLETEGN--ELRLVATDGHRLAVRKLELSVENPDIFSVIVPRKTLLELAK 78 (116)
T ss_pred CCCHHHHHHHHHHEEEEECCCCCHHHHEEEEEEEECC--EEEEEEECCHHEEEEEEECCCCCCCCEEEEEEHHHHHHHHH
T ss_conf 9798999999843759980464626612899999899--99999976030010145212478876038977899999998
Q ss_pred HCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCC
Q ss_conf 02776464331334553010025069998512665532
Q gi|254780454|r 211 ILSSKDSSVKVSLSESRIHLNIESLSMSVRLIDGEFPN 248 (385)
Q Consensus 211 ~l~~~~~~v~i~~~~~~i~~~~~~~~~~srLi~g~yPd 248 (385)
T Consensus 79 ~l~~~~~~v~i~~~~~~i~f~~~~~~~~srLieG~yPd 116 (116)
T pfam02767 79 LLTDNGELVKLQIGEGQIRFEFGNVIFTSRLIDGKFPD 116 (116)
T ss_pred HHCCCCCEEEEEECCCEEEEEECCEEEEEEEEEEECCC
T ss_conf 62689973999986999999989999999997106779