HHsearch alignment of GI: 254780454 and MMDB domain: 1rwz_A_
>1rwz_A (A:) DNA polymerase sliding clamp; torus, processivity factor, replication; HET: DNA; 1.80A {Archaeoglobus fulgidus}
Probab=99.58 E-value=2.1e-14 Score=106.05 Aligned_cols=207 Identities=10% Similarity=0.126 Sum_probs=146.4
Q ss_pred HHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEE--------EEECCCCEEEEEHHHHHHHHHCCCCC
Q ss_conf 9998750203788861013389999899799999678289999997--------77526807999499877887407777
Q gi|254780454|r 13 LLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP--------ASVDVCGSITVSAHLLYDIVRKLQDG 84 (385)
Q Consensus 13 ~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~--------~~i~~~G~~~v~a~~l~~iik~L~~~ 84 (385)
+++.+...+......|+|+|+++++.+++|.+.|||+..-....++ ..+++++++.||.+.+.+++|.++++
T Consensus 5 ~i~~v~~a~~~~~~~~~l~gv~~~~~~~~l~l~atD~~rla~~~~~~~~~~~~~~~~~~~~~~~ip~k~l~~i~k~~~~~ 84 (245)
T 1rwz_A 5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKSISTK 84 (245)
T ss_dssp EEEHHHHHHHHHHHHTTCSEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHHHHHHHTTSCTT
T ss_pred EECHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCEEEEEEEECHHHCEEECCCCCCEEEEEHHHHHHHHHHCCCC
T ss_conf 84288999999999998623899990883699999887489999997856671322478836788989999998743688
Q ss_pred CCEEEEEECCCCEEEEEEECCCEEEEECCCC---CCCCCCCCCCCCEEEECCCHHHHHHHCCEEEECCCCCCCCCEEEEE
Q ss_conf 7304777336750899986782024303662---1143212332430450561135542022023002455652101166
Q gi|254780454|r 85 AQISFFKENELGTEVNISHGDSNFYLQSFPE---SEFPSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIF 161 (385)
Q Consensus 85 ~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~---~~fP~~~~~~~~~~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~ 161 (385)
........+ +.++.+++++..+.....+. +..+.+|..+....+.++.+.|+++++++.... ..+.
T Consensus 85 ~~~v~~~~~--~~~i~~~~~~~~~~~~l~~~~~p~~~~~ip~~~~~~~i~i~~~~l~~~i~r~~~~~---------~~v~ 153 (245)
T 1rwz_A 85 DLVELIVED--ESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKIS---------DQVI 153 (245)
T ss_dssp SEEEEEESS--SSEEEEEETTEEEEEECBCGGGSCCCCCCCCCCCSEEEEEEHHHHHHHHHHHHTTC---------SEEE
T ss_pred CEEEEEECC--CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC---------CEEE
T ss_conf 169999837--98139999750012341231113246799986666799703999999998773348---------7799
Q ss_pred EEECCCCCEEEEEEECCEEEEEEEEECCC-CCCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCC-C-CCCEEEEC
Q ss_conf 77617873489998534157666643578-753310000010001222210277646433133-4-55301002
Q gi|254780454|r 162 FHINEEDLKLCAVATDGHRLAVAEVDIVA-QIAKMPSIIVPRKAVGEILRILSSKDSSVKVSL-S-ESRIHLNI 232 (385)
Q Consensus 162 ~~~~~~~~~l~~vaTDg~RLa~~~~~~~~-~~~~~~~~iiP~k~l~el~k~l~~~~~~v~i~~-~-~~~i~~~~ 232 (385)
+.++.+...+.+.+.++..-......... ...++..+.++.+.|.+..|.+..++ +.+.. + .+-+.+..
T Consensus 154 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~n~~yL~~~l~~~~~~~--~~~~~~~~~~p~~i~~ 225 (245)
T 1rwz_A 154 FRSDKEGFRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKEFCKVAGSGD--LLTIHLGTNYPVRLVF 225 (245)
T ss_dssp EEEETTEEEEEEECSSCEEEEEECGGGSSEECCCCEEEEEEHHHHHHHGGGCCTTC--EEEEEECSSSCEEEEE
T ss_pred EEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHCCCCC--EEEEEECCCCCEEEEE
T ss_conf 99827679999987662599984687410213775542873899998860425898--6999972998889999