HHsearch alignment of GI: 254780454 and MMDB domain: 1rwz_A_

>1rwz_A (A:) DNA polymerase sliding clamp; torus, processivity factor, replication; HET: DNA; 1.80A {Archaeoglobus fulgidus}
Probab=99.58  E-value=2.1e-14  Score=106.05  Aligned_cols=207  Identities=10%  Similarity=0.126  Sum_probs=146.4

Q ss_pred             HHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEE--------EEECCCCEEEEEHHHHHHHHHCCCCC
Q ss_conf             9998750203788861013389999899799999678289999997--------77526807999499877887407777
Q gi|254780454|r   13 LLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP--------ASVDVCGSITVSAHLLYDIVRKLQDG   84 (385)
Q Consensus        13 ~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~--------~~i~~~G~~~v~a~~l~~iik~L~~~   84 (385)
                      +++.+...+......|+|+|+++++.+++|.+.|||+..-....++        ..+++++++.||.+.+.+++|.++++
T Consensus         5 ~i~~v~~a~~~~~~~~~l~gv~~~~~~~~l~l~atD~~rla~~~~~~~~~~~~~~~~~~~~~~~ip~k~l~~i~k~~~~~   84 (245)
T 1rwz_A            5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKSISTK   84 (245)
T ss_dssp             EEEHHHHHHHHHHHHTTCSEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHHHHHHHTTSCTT
T ss_pred             EECHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCEEEEEEEECHHHCEEECCCCCCEEEEEHHHHHHHHHHCCCC
T ss_conf             84288999999999998623899990883699999887489999997856671322478836788989999998743688


Q ss_pred             CCEEEEEECCCCEEEEEEECCCEEEEECCCC---CCCCCCCCCCCCEEEECCCHHHHHHHCCEEEECCCCCCCCCEEEEE
Q ss_conf             7304777336750899986782024303662---1143212332430450561135542022023002455652101166
Q gi|254780454|r   85 AQISFFKENELGTEVNISHGDSNFYLQSFPE---SEFPSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIF  161 (385)
Q Consensus        85 ~~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~---~~fP~~~~~~~~~~~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~  161 (385)
                      ........+  +.++.+++++..+.....+.   +..+.+|..+....+.++.+.|+++++++....         ..+.
T Consensus        85 ~~~v~~~~~--~~~i~~~~~~~~~~~~l~~~~~p~~~~~ip~~~~~~~i~i~~~~l~~~i~r~~~~~---------~~v~  153 (245)
T 1rwz_A           85 DLVELIVED--ESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKIS---------DQVI  153 (245)
T ss_dssp             SEEEEEESS--SSEEEEEETTEEEEEECBCGGGSCCCCCCCCCCCSEEEEEEHHHHHHHHHHHHTTC---------SEEE
T ss_pred             CEEEEEECC--CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC---------CEEE
T ss_conf             169999837--98139999750012341231113246799986666799703999999998773348---------7799


Q ss_pred             EEECCCCCEEEEEEECCEEEEEEEEECCC-CCCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCC-C-CCCEEEEC
Q ss_conf             77617873489998534157666643578-753310000010001222210277646433133-4-55301002
Q gi|254780454|r  162 FHINEEDLKLCAVATDGHRLAVAEVDIVA-QIAKMPSIIVPRKAVGEILRILSSKDSSVKVSL-S-ESRIHLNI  232 (385)
Q Consensus       162 ~~~~~~~~~l~~vaTDg~RLa~~~~~~~~-~~~~~~~~iiP~k~l~el~k~l~~~~~~v~i~~-~-~~~i~~~~  232 (385)
                      +.++.+...+.+.+.++..-......... ...++..+.++.+.|.+..|.+..++  +.+.. + .+-+.+..
T Consensus       154 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~n~~yL~~~l~~~~~~~--~~~~~~~~~~p~~i~~  225 (245)
T 1rwz_A          154 FRSDKEGFRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKEFCKVAGSGD--LLTIHLGTNYPVRLVF  225 (245)
T ss_dssp             EEEETTEEEEEEECSSCEEEEEECGGGSSEECCCCEEEEEEHHHHHHHGGGCCTTC--EEEEEECSSSCEEEEE
T ss_pred             EEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEEEHHHHHHHHHHCCCCC--EEEEEECCCCCEEEEE
T ss_conf             99827679999987662599984687410213775542873899998860425898--6999972998889999