HHsearch alignment of GI: 254780454 and MMDB domain: 2zvv_A_
>2zvv_A (A:) PCNA 1, proliferating cellular nuclear antigen 1; protein-peptide complex, DNA replication, DNA-binding, nucleus, DNA binding protein; 2.00A {Arabidopsis thaliana} PDB: 2zvw_A
Probab=100.00 E-value=0 Score=297.24 Aligned_cols=254 Identities=12% Similarity=0.082 Sum_probs=220.4
Q ss_pred CCCCCCCCCCCCCCCEEEECCCHHHH-HHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCC
Q ss_conf 66211432123324304505611355-42022023002455652101166776178734899985341576666435787
Q gi|254780454|r 113 FPESEFPSTKEEEYVYSFELASSVLK-NLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQ 191 (385)
Q Consensus 113 ~~~~~fP~~~~~~~~~~~~i~~~~l~-~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~ 191 (385)
+++++||.+|+. .+++++..|+ .+++++.||++.++.|++|+||+|++.++ .+.++||||||||+..+.++..
T Consensus 2 ~~~~~fP~~p~~----~~~~~~~~l~~~~~~~~~fa~~~~~~~~~l~gv~~~~~~~--~l~l~atD~~Rla~~~~~~~~~ 75 (276)
T 2zvv_A 2 GSSHHHHHHSSG----LVPRGSHMLELRLVQGSLLKKVLESIKDLVNDANFDCSST--GFSLQAMDSSHVALVSLLLRSE 75 (276)
T ss_dssp -----------------------CEEEEESCTHHHHHHHHHHTTTCSEEEEEEETT--EEEEEEECTTSSEEEEEEEEGG
T ss_pred CCCCCCCCCCCC----CCCCCCEEEEEEECCHHHHHHHHHHHHHHHCEEEEEECCC--EEEEEEECCCCEEEEEEEECHH
T ss_conf 865544443568----5218877899997676999999999998757499998189--7899999988789999999978
Q ss_pred CC------CCCHHCCCCCHHHHHHHHCCCCC-CCCCCCCCCCCEEEEC-----CEEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 53------31000001000122221027764-6433133455301002-----506999851266553221013555661
Q gi|254780454|r 192 IA------KMPSIIVPRKAVGEILRILSSKD-SSVKVSLSESRIHLNI-----ESLSMSVRLIDGEFPNYQNVIPCSNDK 259 (385)
Q Consensus 192 ~~------~~~~~iiP~k~l~el~k~l~~~~-~~v~i~~~~~~i~~~~-----~~~~~~srLi~g~yPdy~~vip~~~~~ 259 (385)
.. ...+++||.|.+.++.|.+...+ ..+.+..+++++.|.+ +..++++++++|.||+|++++|.+++.
T Consensus 76 ~~~~~~~~~~~~~~ip~k~l~~i~k~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~p~~~~~~~~~~~~ 155 (276)
T 2zvv_A 76 GFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHS 155 (276)
T ss_dssp GSSEEEESSCEEEEEEHHHHHHHHHTSCTTCEEEEEECTTCSEEEEEEECTTSSCEEEEEEECCCEECCCCCCCCCCCSE
T ss_pred HCCCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf 88644566527988449999999865268956999996267614788523677448999740001442222234566767
Q ss_pred EEEEEHHHHHHHHHHHHHCCCC-------CCCCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECHHHHHHH
Q ss_conf 7998489988889887410123-------555302565176599998078732689999989628843999638899889
Q gi|254780454|r 260 ELRVNCTNLRQAVDRVSIMSSV-------RIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEI 332 (385)
Q Consensus 260 ~~~v~r~~l~~al~Rv~i~~~~-------~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~~~G~~~~i~fN~~yl~d~ 332 (385)
+++++|.+|.++|+|++++++. +...+.++++++.+.+++.+.+.|.+.|.+++.+.|++++++||++||+|+
T Consensus 156 ~i~i~~~~l~~~l~r~~~~s~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~i~fn~~yL~~~ 235 (276)
T 2zvv_A 156 IVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSF 235 (276)
T ss_dssp EEEEEHHHHHHHHHHHHTTCSEEEEEEETTEEEEEEEETTEEEEEEECCCSSCCSGGGCCEEEESSCEEEEEEHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEHHHHHHH
T ss_conf 99964799999999864348706999738852899965774699999512354565420453168726899978999998
Q ss_pred HHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 8735753346633899965898758994377654445556676379983212
Q gi|254780454|r 333 IDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMR 384 (385)
Q Consensus 333 L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMPvr 384 (385)
|+++++ +++.+.+.++.+|+++....+ ++..+.|+||||.
T Consensus 236 l~~~~~-----~~~v~~~~~~~~p~~i~~~~~-------~~~~~~~iimP~~ 275 (276)
T 2zvv_A 236 TKATPL-----SDTVTISLSSELPVVVEYKVA-------EMGYIRYYLAPKI 275 (276)
T ss_dssp GGGGGG-----CSEEEEEECTTSCEEEEEEET-------TTEEEEEEECCBC
T ss_pred HHHHCC-----CCEEEEEEECCCCEEEEEEEC-------CCCEEEEEECCCC
T ss_conf 616258-----987999984995789999918-------9829999983256