HHsearch alignment of GI: 254780454 and MMDB domain: 2zvv_A_
>2zvv_A (A:) PCNA 1, proliferating cellular nuclear antigen 1; protein-peptide complex, DNA replication, DNA-binding, nucleus, DNA binding protein; 2.00A {Arabidopsis thaliana} PDB: 2zvw_A
Probab=99.03 E-value=5.6e-10 Score=79.15 Aligned_cols=228 Identities=9% Similarity=0.010 Sum_probs=133.5
Q ss_pred CEEEEEHHHHHHHH-HHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEE--------EECCCCEEEEEH
Q ss_conf 95898599999999-987502037888610133899998997999996782899999977--------752680799949
Q gi|254780454|r 1 MKITVERSDILELL-GHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPA--------SVDVCGSITVSA 71 (385)
Q Consensus 1 Mk~~i~~~~L~~~l-~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~--------~i~~~G~~~v~a 71 (385)
|.|+++...|..++ +.+.-.+......|++.|+++++.++++.+.|||+-.-....+.. .++++.++.||.
T Consensus 13 ~~~~~~~~~l~~~~~~~~~fa~~~~~~~~~l~gv~~~~~~~~l~l~atD~~Rla~~~~~~~~~~~~~~~~~~~~~~~ip~ 92 (276)
T 2zvv_A 13 GLVPRGSHMLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNL 92 (276)
T ss_dssp --------CEEEEESCTHHHHHHHHHHTTTCSEEEEEEETTEEEEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEH
T ss_pred CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEECCCCEEEEEEEECHHHCCCCCCCCCEEEEECH
T ss_conf 85218877899997676999999999998757499998189789999998878999999997888644566527988449
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECC----CEEEEECCCCCCCCCC---CCCCCCEEEECCCHHHHHHHCCE
Q ss_conf 9877887407777730477733675089998678----2024303662114321---23324304505611355420220
Q gi|254780454|r 72 HLLYDIVRKLQDGAQISFFKENELGTEVNISHGD----SNFYLQSFPESEFPST---KEEEYVYSFELASSVLKNLVERT 144 (385)
Q Consensus 72 ~~l~~iik~L~~~~~i~~~~~~~~~~~i~i~~~~----~~~~l~~~~~~~fP~~---~~~~~~~~~~i~~~~l~~~i~~t 144 (385)
+.+.+++|.+.....+.+....+ +..+.+.... ........-.+.||.. ...+....+.++.+.|.++++++
T Consensus 93 k~l~~i~k~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~~p~~~~~~~~~~~~~i~i~~~~l~~~l~r~ 171 (276)
T 2zvv_A 93 GNMSKMLKCAGNDDIITIKADDG-GDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHSIVRMPSNEFSRICKDL 171 (276)
T ss_dssp HHHHHHHHTSCTTCEEEEEECTT-CSEEEEEEECTTSSCEEEEEEECCCEECCCCCCCCCCCSEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEECC-CCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH
T ss_conf 99999986526895699999626-76147885236774489997400014422222345667679996479999999986
Q ss_pred EEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCC-CCCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 2300245565210116677617873489998534157666643578-753310000010001222210277646433133
Q gi|254780454|r 145 HFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVA-QIAKMPSIIVPRKAVGEILRILSSKDSSVKVSL 223 (385)
Q Consensus 145 ~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~-~~~~~~~~iiP~k~l~el~k~l~~~~~~v~i~~ 223 (385)
......-.....-+.+.+.+..+++.+...+.++.. ......++. ..++...+....+.|.+.++.+... +.+.+..
T Consensus 172 ~~~s~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~g~~~~i~fn~~yL~~~l~~~~~~-~~v~~~~ 249 (276)
T 2zvv_A 172 SSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTT-VDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLS-DTVTISL 249 (276)
T ss_dssp HTTCSEEEEEEETTEEEEEEEETTEEEEEEECCCSS-CCSGGGCCEEEESSCEEEEEEHHHHHHHGGGGGGC-SEEEEEE
T ss_pred HCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCC-CCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHCCC-CEEEEEE
T ss_conf 434870699973885289996577469999951235-45654204531687268999789999986162589-8799998
Q ss_pred CCCC-EEEE
Q ss_conf 4553-0100
Q gi|254780454|r 224 SESR-IHLN 231 (385)
Q Consensus 224 ~~~~-i~~~ 231 (385)
+.++ +.+.
T Consensus 250 ~~~~p~~i~ 258 (276)
T 2zvv_A 250 SSELPVVVE 258 (276)
T ss_dssp CTTSCEEEE
T ss_pred ECCCCEEEE
T ss_conf 499578999