HHsearch alignment of GI: 254780454 and MMDB domain: 3a1j_B_
>3a1j_B (B:) HHUS1, checkpoint protein HUS1; DNA damage, DNA repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein, polymorphism, cytoplasm; HET: SUC; 2.50A {Homo sapiens} PDB: 3g65_C 3ggr_B
Probab=97.73 E-value=0.0029 Score=38.40 Aligned_cols=204 Identities=8% Similarity=0.102 Sum_probs=114.8
Q ss_pred EEEEEEECCCCCEEEEEEECCEEEEEEEEEC----CCCC-----------CCCCHHCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 1166776178734899985341576666435----7875-----------331000001000122221027764643313
Q gi|254780454|r 158 NGIFFHINEEDLKLCAVATDGHRLAVAEVDI----VAQI-----------AKMPSIIVPRKAVGEILRILSSKDSSVKVS 222 (385)
Q Consensus 158 ~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~----~~~~-----------~~~~~~iiP~k~l~el~k~l~~~~~~v~i~ 222 (385)
.=++|++..++ +.+.+.|+-+-+.....+ ..-. +....+-++...|.-++|.... ...+++.
T Consensus 29 ~e~~~~~~~~g--i~~~~~d~s~v~~v~~~~~~~~~~~F~~y~~~~~s~~~~~i~~~v~~~~L~kiLk~~~~-~d~l~l~ 105 (281)
T 3a1j_B 29 KTCTLRISPDK--LNFILCDKLANGGVSXWCELEQENFFNEFQXEGVSAENNEIYLELTSENLSRALKTAQN-ARALKIK 105 (281)
T ss_dssp SEEEEEECSSE--EEEEECCCC--CCCEEEEEEEGGGTCSEEEEECSSSTTCCEEEEEEHHHHHHHGGGGGG-EEEEEEE
T ss_pred CEEEEEECCCE--EEEEECCCCCCCCEEEEEEECHHHCCCCCEEEECCCCCCEEEEEECHHHHHHHHHCCCC-CCEEEEE
T ss_conf 78999982788--99997578799835899994567588530676525569979999879999999860066-7569999
Q ss_pred CCCC---CEEEECCE---------EEEEEEECCCCCCCCCCC-CCC--CCCCEEEEEHHHHH-HHHHHHHHCCCCCCCCC
Q ss_conf 3455---30100250---------699985126655322101-355--56617998489988-88988741012355530
Q gi|254780454|r 223 LSES---RIHLNIES---------LSMSVRLIDGEFPNYQNV-IPC--SNDKELRVNCTNLR-QAVDRVSIMSSVRIQAV 286 (385)
Q Consensus 223 ~~~~---~i~~~~~~---------~~~~srLi~g~yPdy~~v-ip~--~~~~~~~v~r~~l~-~al~Rv~i~~~~~~~~i 286 (385)
..++ .+.+.+.. .+....+..-.=.+++.+ +|. ++...+.+....+. ..++++..+++. +
T Consensus 106 l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~i~~l~~~~~~~l~~P~~~~~~~~i~~p~~~~~k~~~~~~~~~~d~----v 181 (281)
T 3a1j_B 106 LTNKHFPCLTVSVELLSXSSSSRIVTHDIPIKVIPRKLWKDLQEPVVPDPDVSIYLPVLKTXKSVVEKXKNISNH----L 181 (281)
T ss_dssp EECSSSCEEEEEEEECCSSSCCCEEEEEEECEECCGGGGGGGSCCCCCCCSEEEECCCHHHHHHHHHHHHTTCSE----E
T ss_pred EECCCCCCEEEEEEEECCCCCCCEEEEECCEEECCHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCE----E
T ss_conf 405899857999994224788747999688598388998554389888998269659789999999987514876----9
Q ss_pred EEEEEC-CEEEEEECCCCCEEEEEEEE-------------E-EECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEEC
Q ss_conf 256517-65999980787326899999-------------8-96288439996388998898735753346633899965
Q gi|254780454|r 287 KLSLSS-DKLCMTVDNPDMGKAIESMN-------------V-YYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLD 351 (385)
Q Consensus 287 ~l~~~~-~~l~i~~~~~e~g~~~e~i~-------------~-~~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~ 351 (385)
.+..++ |.+.+++.+ |.+++.-.+. . .-.+++.+..|..+||..++++...+ +.|++.+.
T Consensus 182 ~i~~~~~g~l~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~k~~~~s----~~v~i~~~ 256 (281)
T 3a1j_B 182 VIEANLDGELNLKIET-ELVCVTTHFKDLGNPPLASESTHEDRNVEHXAEVHIDIRKLLQFLAGQQVN----PTKALCNI 256 (281)
T ss_dssp EEEECTTSCEEEEEEC-SSEEEEEEECCCCCCCC----------CCCCEEEEEEHHHHHHHHHHCCSC----CSEEEEEE
T ss_pred EEEECCCCEEEEEEEE-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCC----CCEEEEEE
T ss_conf 9997268818999972-538999995578898877542234788665599999979989862544557----82999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 8987589943776544455566763799832
Q gi|254780454|r 352 SSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385)
Q Consensus 352 ~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385)
+ ..|+.+.-.- ++.+++...+|
T Consensus 257 ~-~~pl~l~~~~--------~~~g~l~fylP 278 (281)
T 3a1j_B 257 V-NNKXVHFDLL--------HEDVSLQYFIP 278 (281)
T ss_dssp E-TTTEEEEEEE--------SSSCEEEEEEE
T ss_pred E-CCCEEEEEEE--------CCCEEEEEEEE
T ss_conf 5-7968999997--------89989999961