HHsearch alignment of GI: 254780454 and MMDB domain: 3g65_A_
>3g65_A (A:) Cell cycle checkpoint control protein RAD9A; PCNA, DNA binding clamp, DNA damage, DNA repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein; 2.90A {Homo sapiens}
Probab=99.80 E-value=3.5e-19 Score=135.00 Aligned_cols=218 Identities=15% Similarity=0.138 Sum_probs=163.8
Q ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCC----------CCCCHHCCCCCHHHHHHHHCCCCCC-
Q ss_conf 24556521011667761787348999853415766664357875----------3310000010001222210277646-
Q gi|254780454|r 149 ATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQI----------AKMPSIIVPRKAVGEILRILSSKDS- 217 (385)
Q Consensus 149 s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~----------~~~~~~iiP~k~l~el~k~l~~~~~- 217 (385)
+-+..+++.++++|++.++ .|+++|+|++|+|.....++... .....+.|+.|.|.++.|.+...+.
T Consensus 16 ~~~~l~~i~~~v~~~i~~~--~l~l~a~d~~r~a~~~~~~~~~~F~~y~~~~~~~~~~~~~i~~k~l~~ilk~~~~~~~~ 93 (296)
T 3g65_A 16 AVHSLSRIGDELYLEPLED--GLSLRTVNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKT 93 (296)
T ss_dssp HHHHHHTTCSEEEEEEETT--EEEEEEECTTSCEEEEEEETTSSCCCCCC-------CCEEEEHHHHHTTTSSTTC----
T ss_pred HHHHHHHHCCCEEEEEECC--EEEEEEECCCCEEEEEEEECHHHCCCEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCC
T ss_conf 9999997479099999179--48999998777699999986674712756699874189999869989986043413552
Q ss_pred CCCCCC----CCCCEEEECCEEEEEEEECCCCCCCCCCCCC----CCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 433133----4553010025069998512665532210135----55661799848998888988741012355530256
Q gi|254780454|r 218 SVKVSL----SESRIHLNIESLSMSVRLIDGEFPNYQNVIP----CSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLS 289 (385)
Q Consensus 218 ~v~i~~----~~~~i~~~~~~~~~~srLi~g~yPdy~~vip----~~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~ 289 (385)
.+.+.. ..+.+.+.+.+.....+...++|+++....+ .+++.++.++.+.|.++++++...++. +.+.
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~----i~i~ 169 (296)
T 3g65_A 94 VEKCCISLNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAE----VTLG 169 (296)
T ss_dssp CCEEEEEECCC---EEEEEECGGGCEEEEEECCCCCCCCCCCCCGGGCSCEEEEEHHHHHHHSTTSCTTCCE----EEEE
T ss_pred EEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCHHHCCEEEEECHHHHHHHHHHCCCCCCE----EEEE
T ss_conf 117999983899769999995688359999876515433466782358789997689999999855356455----9999
Q ss_pred EECCEEEEEECCCCCEE------E-------EEEEEEEECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
Q ss_conf 51765999980787326------8-------9999989628843999638899889873575334663389996589875
Q gi|254780454|r 290 LSSDKLCMTVDNPDMGK------A-------IESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSS 356 (385)
Q Consensus 290 ~~~~~l~i~~~~~e~g~------~-------~e~i~~~~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p 356 (385)
..++.+.+++.+...+. . .|.+.....|++.+++||.+||.++|++++.- .+.|.+.+..+..|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~f~~k~l~~~lk~~~~~---s~~v~i~~~~~g~P 246 (296)
T 3g65_A 170 IGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESA---NLNLSIHFDAPGRP 246 (296)
T ss_dssp EETTTEEEEEECCC-----CCCCCEEEEEECGGGCSEEECCTTCEEEEEHHHHHHHHHHHHHT---TCEEEEECCSTTSC
T ss_pred ECCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHC---CCCEEEEECCCCCC
T ss_conf 779984999973156766554204888864566403798389848999999999999999766---98189998789966
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 899437765444555667637998321
Q gi|254780454|r 357 VFIRGKDKDSKNNKDNKVNAFYVLMPM 383 (385)
Q Consensus 357 ~~i~~~~~~~~~~~~~~~~~~~liMPv 383 (385)
+++....+.. ...|+|||+
T Consensus 247 ~~i~~~~~~~--------~~~~~l~p~ 265 (296)
T 3g65_A 247 AIFTIKDSLL--------DGHFVLATL 265 (296)
T ss_dssp EEEEEECSSC--------EEEEEECCC
T ss_pred EEEEEECCCE--------EEEEEEECC
T ss_conf 8999947958--------999999446