HHsearch results for GI: 254780454 and protein with PDBid: 2ijx_A
>2ijx_A DNA polymerase sliding clamp A; PCNA3 subunit, protein-protein interaction, PCNA123 heterotrimer, DNA binding protein; HET: DNA; 1.90A {Sulfolobus solfataricus P2} PDB: 2nti_F* 2hii_C 2hik_C 2ix2_C*
Probab=98.99 E-value=4.3e-07 Score=60.73 Aligned_cols=219 Identities=13% Similarity=0.184 Sum_probs=146.5
Q ss_pred CCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCC------CCCCHHCCCCCHHH
Q ss_conf 611355420220230024556521011667761787348999853415766664357875------33100000100012
Q gi|254780454|r 133 ASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQI------AKMPSIIVPRKAVG 206 (385)
Q Consensus 133 ~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~------~~~~~~iiP~k~l~ 206 (385)
++..|+++++... ....-++|++..++ +.+.|.|..|.+.....++... +++..+-|+.+.+.
T Consensus 7 ~~~~fk~i~~~l~---------~l~~e~~~~~~~~G--i~i~~~D~s~v~lv~~~l~~~~F~~Y~~~~~~~igi~~~~l~ 75 (244)
T 2ijx_A 7 DVRVLKDIIQALA---------RLVDEAVLKFKQDS--VELVALDRAHISLISVNLPREMFKEYDVNDEFKFGFNTQYLM 75 (244)
T ss_dssp CHHHHHHHHHHHH---------HHCSEEEEEECSSE--EEEEEECTTSSEEEEEEEEGGGCSEEECSSCEEEEEEHHHHH
T ss_pred CHHHHHHHHHHHH---------HHHCEEEEEEECCE--EEEEEECCCCEEEEEEEECHHHCCEECCCCCEEEEEEHHHHH
T ss_conf 7899999999999---------87582999993897--899999899689999998877693332377779899999999
Q ss_pred HHHHHCCCCCCCCCCCCCCC--CEEEEC--CEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC
Q ss_conf 22210277646433133455--301002--50699985126655322101355566179984899888898874101235
Q gi|254780454|r 207 EILRILSSKDSSVKVSLSES--RIHLNI--ESLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVR 282 (385)
Q Consensus 207 el~k~l~~~~~~v~i~~~~~--~i~~~~--~~~~~~srLi~g~yPdy~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~~~ 282 (385)
.++|....+ +.+++.++++ .+.... .+..+..++++..-++..- .+.+++..+.++.+.|.+.++.+..+.+
T Consensus 76 kilk~~~~~-d~l~l~~~~~~~~~i~~~~~~~~~~~l~l~d~~~~~~~~-p~~~~~~~i~~~s~~f~~~ik~l~~~~d-- 151 (244)
T 2ijx_A 76 KILKVAKRK-EAIEIASESPDSVIINIIGSTNREFNVRNLEVSEQEIPE-INLQFDISATISSDGFKSAISEVSTVTD-- 151 (244)
T ss_dssp HHHTTCCSS-CEEEEEEEETTEEEEEEESSSEEEEEEECCCCCCCCCCC-CCCCCSEEEEEEHHHHHHHHHHHTTTCS--
T ss_pred HHHHCCCCC-CEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCC-CCCCCCEEEEECHHHHHHHHHHHHHCCC--
T ss_conf 998446889-749999935985499970674279996135665356899-8866637998249999999999872198--
Q ss_pred CCCCEEEEECCEEEEEECCCCCEEEEEEEE------EEE-CCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 553025651765999980787326899999------896-2884399963889988987357533466338999658987
Q gi|254780454|r 283 IQAVKLSLSSDKLCMTVDNPDMGKAIESMN------VYY-NECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNS 355 (385)
Q Consensus 283 ~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~------~~~-~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~ 355 (385)
.+.++.+++++.+++.+. |++.-.++ ..+ ..++.+..|..+||....++..- .+.|++++. +..
T Consensus 152 --~i~i~~~~~~i~f~~~gd--~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~yl~~~~k~~~l----s~~v~i~~~-~~~ 222 (244)
T 2ijx_A 152 --NVVVEGHEDRILIKAEGE--SEVEVEFSKDTGGLQDLEFSKESKNSYSAEYLDDVLSLTKL----SDYVKISFG-NQK 222 (244)
T ss_dssp --EEEEEEETTEEEEEETTC--TTSEEEEETTTTCEEEEEESSCEEEEEEHHHHHHTGGGGGG----CSEEEEEEE-TTE
T ss_pred --EEEEEEECCEEEEEEECC--CCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC----CCEEEEEEC-CCC
T ss_conf --799999375699999737--61479980589860788750332453138999998714368----986999974-997
Q ss_pred CEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 589943776544455566763799832
Q gi|254780454|r 356 SVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385)
Q Consensus 356 p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385)
|+.+.-.-++ .....|.|-|
T Consensus 223 Pl~~~~~~~~-------~g~i~f~lAP 242 (244)
T 2ijx_A 223 PLQLFFNMEG-------GGKVTYLLAP 242 (244)
T ss_dssp EEEEEEECGG-------GCEEEEEECC
T ss_pred CEEEEEECCC-------CEEEEEEECC
T ss_conf 7899999289-------8699999914