HHsearch results for GI: 254780454 and protein with PDBid: 2ijx_A
>2ijx_A DNA polymerase sliding clamp A; PCNA3 subunit, protein-protein interaction, PCNA123 heterotrimer, DNA binding protein; HET: DNA; 1.90A {Sulfolobus solfataricus P2} PDB: 2nti_F* 2hii_C 2hik_C 2ix2_C*
Probab=98.44 E-value=6.9e-05 Score=47.33 Aligned_cols=204 Identities=14% Similarity=0.191 Sum_probs=125.2
Q ss_pred CEEEE-EHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCE--EEEEEEEEE------EECCCCEEEEEH
Q ss_conf 95898-599999999987502037888610133899998997999996782--899999977------752680799949
Q gi|254780454|r 1 MKITV-ERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPE--IEITGAIPA------SVDVCGSITVSA 71 (385)
Q Consensus 1 Mk~~i-~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~--~~i~~~i~~------~i~~~G~~~v~a 71 (385)
||+.. +-+.|...++.+++++ ..+.+++..+++.+.+.|.. .-+...++. +++++-.+.|+-
T Consensus 1 m~~~~~~~~~fk~i~~~l~~l~---------~e~~~~~~~~Gi~i~~~D~s~v~lv~~~l~~~~F~~Y~~~~~~~igi~~ 71 (244)
T 2ijx_A 1 MKVVYDDVRVLKDIIQALARLV---------DEAVLKFKQDSVELVALDRAHISLISVNLPREMFKEYDVNDEFKFGFNT 71 (244)
T ss_dssp CEEEESCHHHHHHHHHHHHHHC---------SEEEEEECSSEEEEEEECTTSSEEEEEEEEGGGCSEEECSSCEEEEEEH
T ss_pred CEEEECCHHHHHHHHHHHHHHH---------CEEEEEEECCEEEEEEECCCCEEEEEEEECHHHCCEECCCCCEEEEEEH
T ss_conf 9799857899999999999875---------8299999389789999989968999999887769333237777989999
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEC--CCEEEEECCCCCCCC-CCCCCCCCEEEECCCHHHHHHHCCEEEEC
Q ss_conf 987788740777773047773367508999867--820243036621143-21233243045056113554202202300
Q gi|254780454|r 72 HLLYDIVRKLQDGAQISFFKENELGTEVNISHG--DSNFYLQSFPESEFP-STKEEEYVYSFELASSVLKNLVERTHFAM 148 (385)
Q Consensus 72 ~~l~~iik~L~~~~~i~~~~~~~~~~~i~i~~~--~~~~~l~~~~~~~fP-~~~~~~~~~~~~i~~~~l~~~i~~t~~a~ 148 (385)
+.|..++|.+.++..+.+..+++. ..+....+ ...|.++.++.+..+ ..|..+....+.+++..|+++++...- .
T Consensus 72 ~~l~kilk~~~~~d~l~l~~~~~~-~~~i~~~~~~~~~~~l~l~d~~~~~~~~p~~~~~~~i~~~s~~f~~~ik~l~~-~ 149 (244)
T 2ijx_A 72 QYLMKILKVAKRKEAIEIASESPD-SVIINIIGSTNREFNVRNLEVSEQEIPEINLQFDISATISSDGFKSAISEVST-V 149 (244)
T ss_dssp HHHHHHHTTCCSSCEEEEEEEETT-EEEEEEESSSEEEEEEECCCCCCCCCCCCCCCCSEEEEEEHHHHHHHHHHHTT-T
T ss_pred HHHHHHHHCCCCCCEEEEEEECCC-CEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHH-C
T ss_conf 999999844688974999993598-54999706742799961356653568998866637998249999999999872-1
Q ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCC------CCCCCHHCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 2455652101166776178734899985341576666435787------5331000001000122221027764643313
Q gi|254780454|r 149 ATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQ------IAKMPSIIVPRKAVGEILRILSSKDSSVKVS 222 (385)
Q Consensus 149 s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~------~~~~~~~iiP~k~l~el~k~l~~~~~~v~i~ 222 (385)
+ |. +.+..+++...+. ++|.-=+......+.. ...+.....+.+.+..+.|...- .+.|++.
T Consensus 150 ~-d~-------i~i~~~~~~i~f~---~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~yl~~~~k~~~l-s~~v~i~ 217 (244)
T 2ijx_A 150 T-DN-------VVVEGHEDRILIK---AEGESEVEVEFSKDTGGLQDLEFSKESKNSYSAEYLDDVLSLTKL-SDYVKIS 217 (244)
T ss_dssp C-SE-------EEEEEETTEEEEE---ETTCTTSEEEEETTTTCEEEEEESSCEEEEEEHHHHHHTGGGGGG-CSEEEEE
T ss_pred C-CE-------EEEEEECCEEEEE---EECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CCEEEEE
T ss_conf 9-87-------9999937569999---973761479980589860788750332453138999998714368-9869999
Q ss_pred CCCCC
Q ss_conf 34553
Q gi|254780454|r 223 LSESR 227 (385)
Q Consensus 223 ~~~~~ 227 (385)
++.++
T Consensus 218 ~~~~~ 222 (244)
T 2ijx_A 218 FGNQK 222 (244)
T ss_dssp EETTE
T ss_pred ECCCC
T ss_conf 74997