HHsearch results for GI: 254780454 and protein with PDBid: 2zvv_A
>2zvv_A PCNA 1, proliferating cellular nuclear antigen 1; protein-peptide complex, DNA replication, DNA-binding, nucleus, DNA binding protein; 2.00A {Arabidopsis thaliana} PDB: 2zvw_A
Probab=98.78 E-value=5.2e-06 Score=54.17 Aligned_cols=220 Identities=17% Similarity=0.264 Sum_probs=145.2
Q ss_pred CCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCC------CCCHHCCCCCHH
Q ss_conf 56113554202202300245565210116677617873489998534157666643578753------310000010001
Q gi|254780454|r 132 LASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIA------KMPSIIVPRKAV 205 (385)
Q Consensus 132 i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~------~~~~~iiP~k~l 205 (385)
..+..|+++++. ......=+.|++..++. .+-|.|..|.+...+.++...- ....+-|..+.+
T Consensus 27 ~~~~~~k~i~~~---------l~~l~~e~~~~~~~~Gi--~i~~mD~s~vali~i~l~~~~F~~Y~~~~~~~igi~~~~l 95 (276)
T 2zvv_A 27 VQGSLLKKVLES---------IKDLVNDANFDCSSTGF--SLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNM 95 (276)
T ss_dssp SCTHHHHHHHHH---------HTTTCSEEEEEEETTEE--EEEEECTTSSEEEEEEEEGGGSSEEEESSCEEEEEEHHHH
T ss_pred CCHHHHHHHHHH---------HHHHHCEEEEEEECCEE--EEEEECCCCEEEEEEEECHHHCEEEEECCCEEEEEEHHHH
T ss_conf 676999999999---------99875829999927978--9999988878999999897879088517975899997998
Q ss_pred HHHHHHCCCCCCCCCCCCCCC--CEEEECC------EEEEEEEECCCCCCCCCCCCC-CCCCCEEEEEHHHHHHHHHHHH
Q ss_conf 222210277646433133455--3010025------069998512665532210135-5566179984899888898874
Q gi|254780454|r 206 GEILRILSSKDSSVKVSLSES--RIHLNIE------SLSMSVRLIDGEFPNYQNVIP-CSNDKELRVNCTNLRQAVDRVS 276 (385)
Q Consensus 206 ~el~k~l~~~~~~v~i~~~~~--~i~~~~~------~~~~~srLi~g~yPdy~~vip-~~~~~~~~v~r~~l~~al~Rv~ 276 (385)
..+.|.+.. .+.+.+.+..+ .+.+... ...+..++++..-. .--+| .+++..++++-+.|.+.++-+.
T Consensus 96 ~kilk~~~~-~d~l~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~d~~~~--~~~ip~~~~~~~i~~~S~~f~~~ik~l~ 172 (276)
T 2zvv_A 96 SKMLKCAGN-DDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSE--HLGIPDAEYHSIVRMPSNEFSRICKDLS 172 (276)
T ss_dssp HHHHHTSCT-TCEEEEEECTTCSEEEEEEECTTSSCEEEEEEECCCEECC--CCCCCCCCCSEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHCCC-CCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCC--CCCCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf 999874469-9679999943876213677415665167888501345521--1333456776799973799999999874
Q ss_pred HCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEE------------EECCCCEEEEECHHHHHHHHHHCCCCCCCCC
Q ss_conf 1012355530256517659999807873268999998------------9628843999638899889873575334663
Q gi|254780454|r 277 IMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNV------------YYNECPMDICFNYKYLLEIIDNISSDEVVDD 344 (385)
Q Consensus 277 i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~------------~~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e 344 (385)
.+.+ .+.+...++.+.+++.+ |.|++.-.+.. ...+++++..|..+||..++++..- .+
T Consensus 173 ~~~d----~v~i~~~~~~~~~~~~g-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fsl~yl~~~~k~~~l----s~ 243 (276)
T 2zvv_A 173 SIGD----TVVISVTKEGVKFSTAG-DIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPL----SD 243 (276)
T ss_dssp TTCS----EEEEEEETTEEEEEEEE-TTEEEEEEECCCSSCCSGGGCCEEEESSCEEEEEEHHHHHHHGGGGGG----CS
T ss_pred CCCC----EEEEEECCCEEEEEEEC-CCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHHCC----CC
T ss_conf 3487----69999859803999957-871799998334444564322010358725799978999998725158----98
Q ss_pred EEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 38999658987589943776544455566763799832
Q gi|254780454|r 345 EVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385)
Q Consensus 345 ~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385)
.|++++. ...|+.+.-.-++ .....|+|-|
T Consensus 244 ~V~l~~~-~~~Pl~l~~~i~~-------~g~i~f~LAP 273 (276)
T 2zvv_A 244 TVTISLS-SELPVVVEYKVAE-------MGYIRYYLAP 273 (276)
T ss_dssp EEEEEEC-TTSCEEEEEEETT-------TEEEEEEECC
T ss_pred EEEEEEE-CCCCEEEEEEECC-------CCEEEEEECC
T ss_conf 7999995-9957899999389-------8099999843