HHsearch results for GI: 254780454 and protein with PDBid: 3k4x_A
>3k4x_A PCNA, proliferating cell nuclear antigen; DNA replication, DNA-binding; HET: DNA; 2.98A {Saccharomyces cerevisiae}
Probab=99.59 E-value=3.2e-10 Score=79.69 Aligned_cols=113 Identities=24% Similarity=0.419 Sum_probs=49.2
Q ss_pred EEEEEECCCCCCCCCCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEEE
Q ss_conf 99985126655322101355-56617998489988889887410123555302565176599998078732689999989
Q gi|254780454|r 236 SMSVRLIDGEFPNYQNVIPC-SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNVY 314 (385)
Q Consensus 236 ~~~srLi~g~yPdy~~vip~-~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~ 314 (385)
.|.-+|++-.-.... +|+ +++..++++-.+|.+.++-+..+++ .|.+..+++.+.+++.+ +.|++.-.+...
T Consensus 386 ~f~l~lidi~~~~~~--iP~~e~~~~i~~~S~~f~~~~kdl~~~~d----~i~i~~~~~~~~~~~~g-d~~~~~~~~~~~ 458 (798)
T 3k4x_A 386 EYSLKLMDIDADFLK--IEELQYDSTLSLPSSEFSKIVRDLSQLSD----SINIMITKETIKFVADG-DIGSGSVIIKPF 458 (798)
T ss_dssp EEEEECBCCCCCCCC--CCCCCCSEEEEEEHHHHHHHHHHHHTTCS----EEEEEEETTEEEEEEEC-SSCEEEEEECCB
T ss_pred EEEEEEECCCCCCCC--CCCCCCCEEEEEEHHHHHHHHHHHHHCCC----EEEEEEECCEEEEEEEC-CCCEEEEEEECC
T ss_conf 999963147866689--99988767999998999999999986498----79999979999999981-273799999347
Q ss_pred ------------ECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEE
Q ss_conf ------------6288439996388998898735753346633899965898758994
Q gi|254780454|r 315 ------------YNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIR 360 (385)
Q Consensus 315 ------------~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~ 360 (385)
-..++++..|..+||..+.++..- .+.|++++... .|+.++
T Consensus 459 ~~~~~~~~~~~~~~~~~~~~~fsl~yL~~~~k~~~l----s~~V~i~~~~d-~Pl~l~ 511 (798)
T 3k4x_A 459 VDMEHPETSIKLEMDQPVDLTFGAKYLLDIIKGSSL----SDRVGIRLSSE-APALFQ 511 (798)
T ss_dssp CCSSSGGGCBEEEESSCEEEEEEHHHHHHHGGGGGT----CSEEEEEECSS-SCEEEE
T ss_pred CCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCC----CCEEEEEECCC-CCEEEE
T ss_conf 776553310454128726899978999987505147----98799998599-778999